Gene BT9727_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_4438 
Symbol 
ID2853942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp4497053 
End bp4497781 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content35% 
IMG OID637515852 
Productpseudouridylate synthase (ribosomal small subunit pseudouridine synthase A) 
Protein accessionYP_038752 
Protein GI49478734 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGATTAG ATAAATTATT AGCAAATATG GGATATGGAA GTAGAAAAGA AGTAAAGAAA 
TTATTGAAAG ACGGCGTTGT GAAAATTGAT GGAATATCGG TGAAAGATGC AAAGGTTCAT
GTAAATGTAG AAGAACAAGA AGTTATGATT CACGGTGAAG TCGTGGAATA TAAAGAGTTT
GTCTACCTAA TGATGCATAA ACCACAAGGC GTTATTTCAG CGACAGAAGA TGATAATCAT
GAAACGGTAA TAGATTTATT AGAGTTAGAA GATGCGATTT TTAATCCGTT CCCAGTTGGA
AGACTTGATA TTGATACAGA AGGTTTCTTA TTAATAACAA ATGACGGGAA GTTATCACAT
CAATTGTTAT CTCCGAAAAA GCATGTGCCG AAAAAATATT ATGCACACGT TGCAGGAGTA
GTAACAGAAG AGGATGTAAA AGAGTTTGCT AAAGGTGTTA TTTTAGATGA TGGCTATGAG
ACAAAGCCAG GTGCACTTAC AATATTAAAA AGCGATGATA TTTCTGAAAT CGAGCTTGTC
ATTACAGAAG GAAAGTTCCA TCAAGTGAAG CGTATGTTTG AAGCGGTAGG GAAAAAAGTA
GTCTACTTAA AGAGAACAGA GATGGGACCG TTAGTGTTAG ATGAAGAGCT AGAACTTGGA
CAATACCGTG AGTTAACAGA TGAAGAAGTA GAGATGTTAA AAACATATCA AGTAGATACT
GAGAAATAG
 
Protein sequence
MRLDKLLANM GYGSRKEVKK LLKDGVVKID GISVKDAKVH VNVEEQEVMI HGEVVEYKEF 
VYLMMHKPQG VISATEDDNH ETVIDLLELE DAIFNPFPVG RLDIDTEGFL LITNDGKLSH
QLLSPKKHVP KKYYAHVAGV VTEEDVKEFA KGVILDDGYE TKPGALTILK SDDISEIELV
ITEGKFHQVK RMFEAVGKKV VYLKRTEMGP LVLDEELELG QYRELTDEEV EMLKTYQVDT
EK