| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4322 |
|---|
| Symbol | citC |
|---|
| ID | 2857583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 4390886 |
|---|
| End bp | 4392193 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637515737 |
|---|
| Product | isocitrate dehydrogenase |
|---|
| Protein accession | YP_038637 |
|---|
| Protein GI | 49481345 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0538] Isocitrate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 80 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGTTA TCACATTGAC GACAGGTGAA AAAATTACTG TAACTAATGG TGTTATGAAT
GTACCAAACA ATCCGATTAT TCCATTTATC GAAGGAGATG GAATTGGTCC TGATATTTGG
GCAGCTGCAT CTCGTGTACT AGAAGCAGCA GTTGAAAAAG CTTATGATGG TGAGAAGAAA
ATCGTTTGGA AAGAAGTGCT TGCAGGGGAA AAAGCATTCA ACCAAACAGG CGAGTGGTTA
CCAGAAGAAA CTTTAAATTT AATTCGTGAA TATTTAATCG CGATTAAAGG TCCACTTACA
ACTCCAGTTG GCGGTGGTAT TCGTTCTCTA AACGTAGCAC TTCGTCAAGA ATTAGATTTA
TATGTATGTC TACGTCCAGT TCGTTATTTT GAAGGTGTTC CTTCACCTGT AAAACGTCCG
GAAGATACTG ATATGGTTAT TTTCCGTGAA AATACAGAAG ACATTTATGC TGGAATTGAA
TATGCGCAAG GATCTCCAGA AGCAGAAAAA GTTCTTGCTT TCTTAAAAGA AGCAATGGGT
GTTAATAAAA TCCGCTTCCC AGAAACATCT GGTATTGGTA TTAAACCAAT CTCAGAAGAA
GGAACAAAGC GTCTTGTTCG TGCTGCAATT CAATATGCAA TTAACGAAAA ACGCTCTTCT
GTTACATTAG TTCATAAAGG AAACATTATG AAATTCACAG AAGGTGCTTT CAAAAACTGG
GGTTACGAAG TAGCGGAACA AGAATTCGGC GACAAAGTAT TTACTTGGGC TGAATATGAT
CGCATCGTTG AGAAAGATGG TAAAGATGCA GCGAATAAAG CGATGGCAGA CGCTGAAGTG
GCTGGAAAAA TCATCGTAAA AGATTCTATT GCAGACATCT TCTTACAACA AATTTTAACT
CGTCCACGTG AGTTCGATGT TGTTGCAACA ATGAACTTAA ACGGAGACTA CATCTCTGAT
GCACTTGCTG CACAAGTAGG TGGAATTGGT ATTGCACCTG GTGCAAACAT TAACTATGTA
ACTGGACATG CTATCTTTGA AGCTACGCAC GGTACAGCTC CAAAATATGC AGGTTTAGAT
AAAGTAAACC CATCTTCAGT TCTTCTTTCT GGTGTATTAT TATTAGAGCA CTTAGGATGG
AACGAAGCTG CGAAATTAGT AACTGCTTCA GTTGAGAAAA CAATTGCTTC AAAAGTAGTA
ACTTATGATT TCGCACGCTT AATGGAAGGT GCAACAGAAG TGAAATGTTC TGAGTTCGCT
AATGAACTTA TTAAAAACAT GGATGTAGCG ATAATCAAAA ACGCATAA
|
|---|
| Protein sequence | MGVITLTTGE KITVTNGVMN VPNNPIIPFI EGDGIGPDIW AAASRVLEAA VEKAYDGEKK
IVWKEVLAGE KAFNQTGEWL PEETLNLIRE YLIAIKGPLT TPVGGGIRSL NVALRQELDL
YVCLRPVRYF EGVPSPVKRP EDTDMVIFRE NTEDIYAGIE YAQGSPEAEK VLAFLKEAMG
VNKIRFPETS GIGIKPISEE GTKRLVRAAI QYAINEKRSS VTLVHKGNIM KFTEGAFKNW
GYEVAEQEFG DKVFTWAEYD RIVEKDGKDA ANKAMADAEV AGKIIVKDSI ADIFLQQILT
RPREFDVVAT MNLNGDYISD ALAAQVGGIG IAPGANINYV TGHAIFEATH GTAPKYAGLD
KVNPSSVLLS GVLLLEHLGW NEAAKLVTAS VEKTIASKVV TYDFARLMEG ATEVKCSEFA
NELIKNMDVA IIKNA
|
|---|
| |