| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4299 |
|---|
| Symbol | emrB |
|---|
| ID | 2858711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 4365331 |
|---|
| End bp | 4367130 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637515714 |
|---|
| Product | multidrug resistance protein B |
|---|
| Protein accession | YP_038614 |
|---|
| Protein GI | 49480683 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.649426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCAA TCGTAATTGC AGGATATGCA CTATTTTGTA TAATCGTCTT CTTCCTTGTA
AATCGTCTTT TACGAAAGAA AAAAACGAAA ATGGGAGAAG AACAAGTCCC AGCCGTAAGT
AAAATAGAAG TAAGTAAGGT AGAAACAGAA GAGAAAGACA TTGAACACAA GCAAGAACCA
GAAATTTCTA ATGTAGTTGA GTTAGAAACA GGAAAGCAAG AAGAAGTAAA ACAAGAAAAA
GAAGTGCCGA AAAAACAAAT GTCTATGCCT GTAGAGAATG TGAACGTAAA AGCAGTTGTA
GCTGTATTAA TTCTCGGCAT GTTCGTTTCT ATTTTAAACC AAACAATCAT TAACGTTGCA
TTGCCTCCGT TAATGAATGA ATTTAACGTA TCAACTTCAA CAGCACAATG GTTAATTACA
GGTTTCATGC TTGTAAATGG TATTTTAGTA CCGATTAGTG CCTTTTTAGT TTCACGATTT
ACGTATCGTA AATTATTCGT AGCAGCAATG TTATTCTTCA CGGTAGGATC TATCATTTGT
GCTACTTCAG GAAACTTTAC AATGATGATG ACAGGGCGCG TAATTCAAGC GGTTGGTGCG
GGTATTTTAA TGCCGGTTGG TATGAATATC TTCATGACAC TATTCCCGCC TCATAAGCGC
GGAGCAGCGA TGGGATTATT AGGTGTAGCA ATGATTTTAG CACCAGCTAT CGGACCAACT
GTAACAGGTT GGGTGATTGA AAACTATAGC TGGAACTTAA TGTTCTATGC GATGTTTATT
ATTGGTTTAA TTATTACGTT CCTGTCTTTA AAATTCTTTA CACTAGCTCA GCCAGTGTCT
AACACGAAAT TAGATGTATT CGGTGTTGTT AGTTCAAGTA TTGGACTAGG AAGCTTATTG
TACGGATTTA GTGAAGCTGG AAATAATAGT TGGACTAGTG CAGAAGTTGT TATTTCACTT
ATTATCGGTG TAATTGGTTT AGCGTTATTT ATTTGGAGAG AGTTAACAAC GGATAATAAA
ATGCTTGATT TACAAGTATT TAAATACCCG GTATTTACTT TTACTTTAGT AATTAATGCA
ATCGTTACGA TGGCATTATT CGGAGGTATG TTATTACTTC CTGTATATCT GCAAAACATT
CGTGGCTTCA CGCCAATTGA ATCTGGTTTA CTACTACTTC CAGGATCATT AATTATGGGA
ATCATGGGAC CAGTAGCGGG TAAATTATTC GATAAATATG GCATTCGTCC ATTAGCGATA
ATTGGATTGG CAATTACGAC GTATGCGACA TATGAATTTA CAAAATTATC GATGGATACA
CCGTATAGCG TTATTATGAC GGATTATATT ATACGCTCAA TTGGTATGTC ATTCATTATG
ATGCCAATTA TGACAGCTGG TATGAACGCG CTACCGATGA AATTAATTTC TCACGGTACA
GCAACGCAAA ATACGTCAAG ACAAGTAGCT GGTTCAATTG GAACAGCGAT ATTAATCACG
CTTATGACGC AACAAACGAC TGCTCACGTA GCAGATTATG GAAACATGTT AACAACGTCA
AATCCAATTT TAGTTGATAA AGTGCATGGC ATGGGGCAAA GCTTAGCGGC CTTAGCCGGC
TCAGCGCAAG CAGGAGATGC GATGAGCACA CAGTTATTAT TTGGACAAAT TTCGAAGTTA
TCTGCAATTA ACGGTATTAA CGATGCTTTC TTAATTGCGA CGATACTCGC AGGGATTGCT
TGGGTGTTAT CGTTCTTCTT ACCATCAGGC AATAAACCAA ATAGAAAAGC AGGGAATTAA
|
|---|
| Protein sequence | MSSIVIAGYA LFCIIVFFLV NRLLRKKKTK MGEEQVPAVS KIEVSKVETE EKDIEHKQEP
EISNVVELET GKQEEVKQEK EVPKKQMSMP VENVNVKAVV AVLILGMFVS ILNQTIINVA
LPPLMNEFNV STSTAQWLIT GFMLVNGILV PISAFLVSRF TYRKLFVAAM LFFTVGSIIC
ATSGNFTMMM TGRVIQAVGA GILMPVGMNI FMTLFPPHKR GAAMGLLGVA MILAPAIGPT
VTGWVIENYS WNLMFYAMFI IGLIITFLSL KFFTLAQPVS NTKLDVFGVV SSSIGLGSLL
YGFSEAGNNS WTSAEVVISL IIGVIGLALF IWRELTTDNK MLDLQVFKYP VFTFTLVINA
IVTMALFGGM LLLPVYLQNI RGFTPIESGL LLLPGSLIMG IMGPVAGKLF DKYGIRPLAI
IGLAITTYAT YEFTKLSMDT PYSVIMTDYI IRSIGMSFIM MPIMTAGMNA LPMKLISHGT
ATQNTSRQVA GSIGTAILIT LMTQQTTAHV ADYGNMLTTS NPILVDKVHG MGQSLAALAG
SAQAGDAMST QLLFGQISKL SAINGINDAF LIATILAGIA WVLSFFLPSG NKPNRKAGN
|
|---|
| |