Gene BT9727_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_4289 
Symbolrnh 
ID2855731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp4355010 
End bp4355945 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content39% 
IMG OID637515704 
Productribonuclease HIII 
Protein accessionYP_038604 
Protein GI49478678 
COG category[L] Replication, recombination and repair 
COG ID[COG1039] Ribonuclease HIII 
TIGRFAM ID[TIGR00716] ribonuclease HIII 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.112453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATT CTATCGTAAT TCAAACAAAT TCTACAGTAA TTGAAGACAT GAAACAACAA 
TATAAACATT CGCTTAGCCC GAAAACTCCG CAAGGCGGGA TCTTCATGGC AAAGGTGCCA
TCTTGCACAA TTACAGCATA TAAATCTGGA AAAGTAATGT TCCAAGGTGG ACGTGCTGAA
GCAGAAGCTG CTCGTTGGCA AACTGTCTCC CAAACTCCAA AAACAGCTGT AAAAAAATCT
GTCGATTCAC ACCGTTATGC ACCGCCTGCT TCCATCGGTA CAATGTCGAT CGTAGGGTCA
GATGAAGTGG GTACTGGTGA TTTCTTCGGA CCGATGACAG TCGTTGCTGT ATATGTAGAT
GCGAAGCAAA TTCCACTACT AAAAGAGCTT GGTGTAAAAG ACTCTAAAAA CTTAAATGAC
GAACAAATTA CTGCCATTGC AAAACAACTT CTACACGTTG TTCCTTACAG CTCTCTCGTT
CTTCATAACG AAAAATATAA CGAGCTATTT GATAAAGGAA ACAACCAAGG TAAACTAAAA
GCTTTGCTAC ATAATAAAGC TATTACAAAC TTATTAACTA AAATTGCGCC TACAAAACCT
GAAGGCGTCT TAATCGACCA ATTCACACAA CCTGATACAT ACTACAAATA TTTAGCAAAA
CAAAAACAGG TACAGCGTGA AAATGTTTAT TTCGCGACAA AAGGAGAAAG CGTCCATTTA
GCTGTTGCCG CTGCCTCCAT TTTAGCTCGT TACTCATTCG TAAAACAATT TAACGAACTA
AGCAAAAAAG CTGGTATGCC GCTTCCAAAA GGTGCAGGTA AACAAGTTGA TATCGCCGCC
GCTAAATTAA TTCAAAAGCT TGGTAAAGAA CGATTACCTG AGTTTGTGAA ACTGCATTTT
GCTAATACGG AAAAGGCGTT TCGCTTACTA AAATAG
 
Protein sequence
MSNSIVIQTN STVIEDMKQQ YKHSLSPKTP QGGIFMAKVP SCTITAYKSG KVMFQGGRAE 
AEAARWQTVS QTPKTAVKKS VDSHRYAPPA SIGTMSIVGS DEVGTGDFFG PMTVVAVYVD
AKQIPLLKEL GVKDSKNLND EQITAIAKQL LHVVPYSSLV LHNEKYNELF DKGNNQGKLK
ALLHNKAITN LLTKIAPTKP EGVLIDQFTQ PDTYYKYLAK QKQVQRENVY FATKGESVHL
AVAAASILAR YSFVKQFNEL SKKAGMPLPK GAGKQVDIAA AKLIQKLGKE RLPEFVKLHF
ANTEKAFRLL K