| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4282 |
|---|
| Symbol | |
|---|
| ID | 2855282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 4346010 |
|---|
| End bp | 4346735 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637515697 |
|---|
| Product | cell surface protein, iron transport associated |
|---|
| Protein accession | YP_038597 |
|---|
| Protein GI | 49478684 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5386] Cell surface protein |
|---|
| TIGRFAM ID | [TIGR03063] sortase B cell surface sorting signal
[TIGR03656] heme uptake protein IsdC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGA TTTCTGTATT ACCCGCTTTT ATTATAACGT TCGTATGTAT GCTAGCTTTT
CTTATCATGC CATATGGGAA AGTTTCAGCA CAACTAGCTG ACGGTACTTA TGACATTAAC
TATGTCATTC AAAAAGCGGA GAATGATTCA GCTTCAATGG CAAATGATTA TTTTGAAAAA
CCAGCTAAGC TAATTGTGAA AAATGGTGAG ATGAGAGTAC AAATTCCGAT GAATCATAGT
GCTTGGATTA CAGAATTTAA AGCACCTGAA AACGGGAATT TTGTTGATGC AAAAGTAGTT
AGCAAGGACG AGGCTGCTGA TAAAAGAACG GTTGAATTTA AAATTGATGA TTTATCAAAA
CCATTAGGAG TAAAAATTCA TGTTGTCGTA CCAAGTGCAA ACTATGACCA CCACTACACA
ATTCGTTTTG CTTTTGATGC AAATGTACAA GCTGTAGGTG GAGATAACGG CGCGGCTGCT
ATAACAAAAA ACAATGATCA AACGAAAACA GGTACACAAG TCAAAGAAGA GAAAACAAAA
GTAGAGAATA AAGAAACAAC AAAAGAAGCG AACAAAGAAA CAAATAAAGA TACAAAAAAT
GAAAATGGTA AAGCTGAAAA AACAGATAAT CCTAAAACAG GCGATGAAGC ACGTATCGGA
TTATTTGCGG TGTTAATTCT TATTTCAGGT GTTTTCTTAA TTCGTAACGT GAAGTTTAGT
AAATAA
|
|---|
| Protein sequence | MRKISVLPAF IITFVCMLAF LIMPYGKVSA QLADGTYDIN YVIQKAENDS ASMANDYFEK
PAKLIVKNGE MRVQIPMNHS AWITEFKAPE NGNFVDAKVV SKDEAADKRT VEFKIDDLSK
PLGVKIHVVV PSANYDHHYT IRFAFDANVQ AVGGDNGAAA ITKNNDQTKT GTQVKEEKTK
VENKETTKEA NKETNKDTKN ENGKAEKTDN PKTGDEARIG LFAVLILISG VFLIRNVKFS
K
|
|---|
| |