Gene BT9727_4252 details

Gene Information

• Locus tag: BT9727_4252
• Symbol: sdhA
• ID: 2855417
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus thuringiensis serovar konkukian str. 97-27
• Kingdom: Bacteria
• Replicon accession: NC_005957
• Strand: -
• Start bp: 4313788
• End bp: 4315581
• Gene Length: 1794 bp
• Protein Length: 597 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637515668
• Product: succinate dehydrogenase flavoprotein subunit
• Protein accession: YP_038568
• Protein GI: 49478676
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup

Plasmid Coverage information

• Num covering plasmid clones: 66
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGGGA AACTTATAGT AGTCGGCGGT GGCTTGGCTG GCTTAATGGC AACGATTAAA 
GCGGCGGAAG CAGGAGTAAA TGTTGAACTG TTCTCTTTAG TACCAGTAAA ACGTTCGCAT 
TCTGTATGTG CCCAAGGTGG AATTAACGGT GCCGTGAATA CGAAAGGTGA AGGGGATTCT 
CCATGGATCC ACTTTGACGA TACAATTTAT GGTGGGGACT TCTTAGCGAA CCAACCACCA 
GTTAAAGCAA TGTGTGAAGC AGCACCTGGT ATCATTCATT TAATGGACCG TATGGGTGTT 
ATGTTCAACC GTACGGAAGA AGGACTTCTT GATTTCCGTC GTTTTGGTGG AACGCAACAT 
CACCGTACAG CATTTGCTGG TGCAACAACT GGACAGCAAT TACTATACGC ATTAGATGAG 
CAAGTACGTC GTCATGAAGT AGCAGGACTT GTAACGAAAT ATGAAGGTTG GGATTTCTTA 
CGAGCTGTTG TTGATGACGA AGGTGTGTGC CGAGGAATCG TTGCACAAGA CTTACAAACA 
ATGGAGATTA AAAGTTTCGG AGCTGATGCC GTGATTATGG CAACAGGGGG CCCTGGTATC 
ATCTTCGGAA AATCAACTAA CTCTATTATT AATACAGGTA CAGCAGCTTC TGCTGTATAT 
CAACAAGGCG CATATTATGC AAACGGTGAG TTCATTCAAA TTCACCCAAC GGCAATTCCT 
GGAGACGATA AATTACGTCT TATGAGTGAA TCTGCACGTG GTGAAGGTGG ACGTGTTTGG 
ACATATAAAG ATGGTAAACC ATGGTACTTC TTAGAAGAAA AATATCCGGC TTACGGAAAT 
CTTGTACCTC GTGATATCGC AACGCGTGAA ATCTTTGATG TTTGCGTAGA GCAAAAACTA 
GGTATTAACG GTGAAAATAT GGTTTACTTA GATCTTTCTC ATAAAGATCC GAAAGAACTA 
GATATTAAAC TTGGTGGAAT TATTGAAATC TATGAGAAAT TTACAGGTGA TGATCCTCGT 
AAACTACCAA TGAAAATCTT CCCAGCTGTT CACTATTCAA TGGGCGGACT ATGGGTTGAT 
TATAAACAGA TGACAAATAT TCCAGGTTTA TTTGCAGCAG GTGAGTGTGA TTATTCTATG 
CACGGTGGTA ACCGTCTTGG TGCGAACTCA CTATTATCAG CAATTTACGG TGGTATGGTA 
GCAGGACCAA ATGCAATTGA ATATATGAAA GGTCTTTCTA AATCATCAGA TGCTGTTTCA 
TCTACTGTGT ATGAACAAAA TGAATTAATC GAAACAGAGA AATTTAACAA TATTTTAACG 
CTCGATGGTA ACGAAAATGC GTATGTTCTT CATAAAGAGC TTGGAGAATG GATGACAGAT 
AATGTTACAG TAGTTCGTGA AAATAAAAAA TTATTAGAAA CAGATGCAAA AATTGAAGAG 
TTAATGGCTC GTTATAAACG TATTAACATT AACGATACAG CAAGATGGAG TAACCAAGGT 
GCTTCATTTA CACGCCAACT TGCAAATATG TTTGAGCTAG CACGTGTTAT TACAATTGGT 
GCATATAACC GTAATGAGAG CCGTGGAGCG CATTACAAAC CTGAATTCCC AAATCGTGAT 
GATGCAAACT TCTTAAAAAC TACGATGGCA AAATTTGAAG GAGAAGGAAA TGCACCAGCA 
TTCCATTACG AAGATGTGGA TATTTCATTA ATTAAACCAC GTAAACGTGA TTATTCTTCA 
AAACACGATG TAGCTGCTAA GAGTGAAGAG AAGGGGGATA AACAACATGT CTGA 

 

Protein sequence

MKGKLIVVGG GLAGLMATIK AAEAGVNVEL FSLVPVKRSH SVCAQGGING AVNTKGEGDS 
PWIHFDDTIY GGDFLANQPP VKAMCEAAPG IIHLMDRMGV MFNRTEEGLL DFRRFGGTQH 
HRTAFAGATT GQQLLYALDE QVRRHEVAGL VTKYEGWDFL RAVVDDEGVC RGIVAQDLQT 
MEIKSFGADA VIMATGGPGI IFGKSTNSII NTGTAASAVY QQGAYYANGE FIQIHPTAIP 
GDDKLRLMSE SARGEGGRVW TYKDGKPWYF LEEKYPAYGN LVPRDIATRE IFDVCVEQKL 
GINGENMVYL DLSHKDPKEL DIKLGGIIEI YEKFTGDDPR KLPMKIFPAV HYSMGGLWVD 
YKQMTNIPGL FAAGECDYSM HGGNRLGANS LLSAIYGGMV AGPNAIEYMK GLSKSSDAVS 
STVYEQNELI ETEKFNNILT LDGNENAYVL HKELGEWMTD NVTVVRENKK LLETDAKIEE 
LMARYKRINI NDTARWSNQG ASFTRQLANM FELARVITIG AYNRNESRGA HYKPEFPNRD 
DANFLKTTMA KFEGEGNAPA FHYEDVDISL IKPRKRDYSS KHDVAAKSEE KGDKQHV