| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4171 |
|---|
| Symbol | |
|---|
| ID | 2854398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 4235895 |
|---|
| End bp | 4236671 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637515587 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_038488 |
|---|
| Protein GI | 49481526 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.402066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTC TTGAAGTAAA GGGATTAACG AAGGTGTATC AATCGAAAGG TTCAGTAGCG
ACGACTGCTT TAAATGATAT AAATTTTAAA ATAGAAGAAG GCGAATTTGT AGGAATTATG
GGTCCTTCAG GGAGCGGGAA AACAACGCTT TTAAATTTAT TAGCAACAAT TGATAAGCAA
ACTTCAGGTC ATGTGCTTGT AAATGGAGAA GAAATTAATC AAATGCGTGC TGCAAAATTA
GCGGAATTTC GCCGTACACA TTTAGGTTTC ATTTTCCAAG ATTTTAACTT ACTTGATACA
TTATCGATTA AAGAAAATAT TATTTTACCG CTTGTAATGG CGAAGAAATC TGTAAATGAA
ATCGATGCGA AAGTACTGGA AATTGCGAAG TTTTTAAATA TCGAAGAAAT TTTAAATAAA
AAGGTTTATG AAGTATCAGG CGGGCAACAA CAACGTGCAG CAGCTGCGAG AGCGATTATT
CATGAACCGA CTTTAATTTT AGCGGATGAG CCTACTGGAA ACTTAGATTC TAAGTCAGCA
AAATCGTTAA TGAGCGCGTT GCAAGACTTA CATGAACAAA AGAGAGTGAC AATTGCAATG
GTGACGCATG ATCCAGTAGC GGCGAGTTAT TGCGAACGCA TTCTTTTCAT TCGCGATGGA
GAGATTTTTT CAGAAATTCA TAAAGGAAGA ACGAAGCAAG CCTTTTTCCA AGAAATTCTG
GACGTACTTG CGATGCTAGG AGGAGAATAT CATGAACTTT CGCCAGCTCG CGCTTAA
|
|---|
| Protein sequence | MSVLEVKGLT KVYQSKGSVA TTALNDINFK IEEGEFVGIM GPSGSGKTTL LNLLATIDKQ
TSGHVLVNGE EINQMRAAKL AEFRRTHLGF IFQDFNLLDT LSIKENIILP LVMAKKSVNE
IDAKVLEIAK FLNIEEILNK KVYEVSGGQQ QRAAAARAII HEPTLILADE PTGNLDSKSA
KSLMSALQDL HEQKRVTIAM VTHDPVAASY CERILFIRDG EIFSEIHKGR TKQAFFQEIL
DVLAMLGGEY HELSPARA
|
|---|
| |