Gene BT9727_4144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_4144 
SymbolsecDF 
ID2855442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp4207769 
End bp4210033 
Gene Length2265 bp 
Protein Length754 aa 
Translation table11 
GC content37% 
IMG OID637515560 
Productbifunctional preprotein translocase subunit SecD/SecF 
Protein accessionYP_038461 
Protein GI49481498 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF
[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF
[TIGR01129] protein-export membrane protein SecD 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGC GTGGTACGAG AATTGCCGCC TTTTTCCTCA TCGTTTTATT AATCGGTGGA 
GTAATTGGTG CGGCAGGAAA AGACATAGCA AAAGGAATTA GTCTAGGACT AGACCTTCGC
GGTGGTTTTG AAATTCTGTA TGAAGTAAAA CCAGCCAAAA AAGGTGATAA AATCGATCGA
GACGTACTTG TAAGTACAGT AGGTGCTCTT GAAAATCGTG TCAATGTTCT CGGTGTAAGT
GAGCCGAACA TTCAAATCGA AGGACAAGAT CGAATTCGTG TACAGCTTGC TGGTGTACAA
GATCAGCAAA AAGCTCGTGA AATGTTGTCA ACACAAGCGA AATTAACATT CCGTGATGTA
GATGACAATC TTCTTATGGA TGGAACGGAT TTAAAAGGTG GCGGAGCGAA GCAAACGTTT
GATGAGCAAG GCCGTGCGAG TGTAGGTCTT ACACTAAAAA GCGCTGAAAA ATTCCGTGAA
GTAACTGAAA AAATTTCAAA AATGCCACCA CCAACAAATT TAATGGTAAT TTGGCTTGAT
TTTGAAGAAG GAAAAGATTC GTATAAAGCA GAATCTGCAA AACCGAATCC GAAATTCTTA
TCAGCAGCAA CAGTAAACCA AGTGTTTAAC CAAGCTGAAG TATCTATCGT AGGTGGAAAC
TTCACAGTTG AAAGTGCGAA ACAACTTTCA TCTTTATTAA ATGCAGGTGC ACTTCCGGTT
GATTTAAAAG AAATGTATTC AACATCAGTT GGAGCGAAGT TTGGTCAACA AGCGTTAGAG
CAAACAATTT TCGCTAGTGC GATTGGTATC GCTCTTATTT TCTTATTTAT GCTTGTATTC
TACCGTTTAC CAGGAATTGT AGCGGTTATT ATGTTAGGTT TATACATTTT CGTTACATTA
CTTGTCTTTA ACTGGATGCA TGCAGTTCTG ACGTTGCCAG GTATTGCGGC GTTAGTGCTC
GGGGTAGGTA TCGCAGTTGA TGCGAATATT ATTACGTACG AGAGACTAAA AGAAGAGCTG
AAAATTGGTA AGTCAATGAT GTCAGCATTC CGTGCTGGTA ACCATCGTTC ATTAGCAACA
ATTTTAGATG CGAACATTAC AACACTTGCA GCAGCTGGTG TATTATTCGT TTACGGTAAT
AGCTCTGTAA AAGGATTCGC AACAAGTTTA ATTGTAAGTA TTTTAGTTGG TTTTATTACG
AACGTATTCG GTACACGTTT CTTACTAAGT TTACTTGTAA AGAGCCGTTA CTTCGATAAA
AAACCAGGAT ACTTTGGTGT GAAACAAAAG GATATTATTC CGTTAACAAA AGGTGTAGTA
CATCCACCAA CGAAATTTGA TCGTATTAAC TTTGTAAATG TCGGTCATAA ATTCCTTATC
TTCTCGATTG TAGTTGTAAT TGCAGGTGCA ATTATTTTAC CAATTTTCAA AATGAATCTT
GGTATTGACT TTGCGAGTGG TACACGTATC GACTTGCAAT CAAAACAATC AGTTACTGTG
TCTGACGTTC ATAAAGATTT TAAAGAATTG AACATTGATG TGAAAGAAGA AAATATTGTA
CCGACTGGAG ATGACAATAA AGGATTCGCA GTTCGTACAT TAGGTGTTCT ATCAAAAGAT
GAAATTGCGA AAACAAAAAC ATTCTTCCAC GATAAATATG GTACAGATCC AAACGTAAGT
ACAGTTTCAC CGACAATCGG TAAAGAAATT GCACGAAATG CATTTATCGC AGTATTAATT
GCTTCTGCAG TTATCATTTT ATACGTAAGT ATTCGATTCC GATTTACGTA CGCATTATCT
GCAGTACTTG CATTACTACA TGATGCATTC GTTATGATTG TTATATTTAG TATTTTACAA
TTAGAGGTAG ACTTAACGTT TATCGCTGCG GTATTAACAA TCATCGGTTA TTCTATTAAT
GACTCGATTG TTACGTTTGA TAGAAACCGT GAATTATACA AACAGAAAAA ACGAGTTCGT
GATATAAAAG ACTTAGAAGA AATCGTAAAT GCAAGTATTC GCCAAACGCT TGGTCGTTCG
ATTAACACCG TATTAACAGT GTTATTCCCA GTAATTGCAC TGCTTATCTT CGGTAGTGAG
TCACTACGTA ACTTCTCGTT TGCGTTACTA GTTGGATTAA TTGTAGGTAC GTATTCTTCT
GTTTTCGTTG CCTCTCAAAT TTGGTTAATG CTTGAAAACC GTCGTTTGAA AAAGGGTAAA
AACAAGAAGA AGGTTGAGAA AGTAGAATCT GAACCGCAAG TATAA
 
Protein sequence
MAKRGTRIAA FFLIVLLIGG VIGAAGKDIA KGISLGLDLR GGFEILYEVK PAKKGDKIDR 
DVLVSTVGAL ENRVNVLGVS EPNIQIEGQD RIRVQLAGVQ DQQKAREMLS TQAKLTFRDV
DDNLLMDGTD LKGGGAKQTF DEQGRASVGL TLKSAEKFRE VTEKISKMPP PTNLMVIWLD
FEEGKDSYKA ESAKPNPKFL SAATVNQVFN QAEVSIVGGN FTVESAKQLS SLLNAGALPV
DLKEMYSTSV GAKFGQQALE QTIFASAIGI ALIFLFMLVF YRLPGIVAVI MLGLYIFVTL
LVFNWMHAVL TLPGIAALVL GVGIAVDANI ITYERLKEEL KIGKSMMSAF RAGNHRSLAT
ILDANITTLA AAGVLFVYGN SSVKGFATSL IVSILVGFIT NVFGTRFLLS LLVKSRYFDK
KPGYFGVKQK DIIPLTKGVV HPPTKFDRIN FVNVGHKFLI FSIVVVIAGA IILPIFKMNL
GIDFASGTRI DLQSKQSVTV SDVHKDFKEL NIDVKEENIV PTGDDNKGFA VRTLGVLSKD
EIAKTKTFFH DKYGTDPNVS TVSPTIGKEI ARNAFIAVLI ASAVIILYVS IRFRFTYALS
AVLALLHDAF VMIVIFSILQ LEVDLTFIAA VLTIIGYSIN DSIVTFDRNR ELYKQKKRVR
DIKDLEEIVN ASIRQTLGRS INTVLTVLFP VIALLIFGSE SLRNFSFALL VGLIVGTYSS
VFVASQIWLM LENRRLKKGK NKKKVEKVES EPQV