Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_4144 |
Symbol | secDF |
ID | 2855442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 4207769 |
End bp | 4210033 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637515560 |
Product | bifunctional preprotein translocase subunit SecD/SecF |
Protein accession | YP_038461 |
Protein GI | 49481498 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF [TIGR01129] protein-export membrane protein SecD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAGC GTGGTACGAG AATTGCCGCC TTTTTCCTCA TCGTTTTATT AATCGGTGGA GTAATTGGTG CGGCAGGAAA AGACATAGCA AAAGGAATTA GTCTAGGACT AGACCTTCGC GGTGGTTTTG AAATTCTGTA TGAAGTAAAA CCAGCCAAAA AAGGTGATAA AATCGATCGA GACGTACTTG TAAGTACAGT AGGTGCTCTT GAAAATCGTG TCAATGTTCT CGGTGTAAGT GAGCCGAACA TTCAAATCGA AGGACAAGAT CGAATTCGTG TACAGCTTGC TGGTGTACAA GATCAGCAAA AAGCTCGTGA AATGTTGTCA ACACAAGCGA AATTAACATT CCGTGATGTA GATGACAATC TTCTTATGGA TGGAACGGAT TTAAAAGGTG GCGGAGCGAA GCAAACGTTT GATGAGCAAG GCCGTGCGAG TGTAGGTCTT ACACTAAAAA GCGCTGAAAA ATTCCGTGAA GTAACTGAAA AAATTTCAAA AATGCCACCA CCAACAAATT TAATGGTAAT TTGGCTTGAT TTTGAAGAAG GAAAAGATTC GTATAAAGCA GAATCTGCAA AACCGAATCC GAAATTCTTA TCAGCAGCAA CAGTAAACCA AGTGTTTAAC CAAGCTGAAG TATCTATCGT AGGTGGAAAC TTCACAGTTG AAAGTGCGAA ACAACTTTCA TCTTTATTAA ATGCAGGTGC ACTTCCGGTT GATTTAAAAG AAATGTATTC AACATCAGTT GGAGCGAAGT TTGGTCAACA AGCGTTAGAG CAAACAATTT TCGCTAGTGC GATTGGTATC GCTCTTATTT TCTTATTTAT GCTTGTATTC TACCGTTTAC CAGGAATTGT AGCGGTTATT ATGTTAGGTT TATACATTTT CGTTACATTA CTTGTCTTTA ACTGGATGCA TGCAGTTCTG ACGTTGCCAG GTATTGCGGC GTTAGTGCTC GGGGTAGGTA TCGCAGTTGA TGCGAATATT ATTACGTACG AGAGACTAAA AGAAGAGCTG AAAATTGGTA AGTCAATGAT GTCAGCATTC CGTGCTGGTA ACCATCGTTC ATTAGCAACA ATTTTAGATG CGAACATTAC AACACTTGCA GCAGCTGGTG TATTATTCGT TTACGGTAAT AGCTCTGTAA AAGGATTCGC AACAAGTTTA ATTGTAAGTA TTTTAGTTGG TTTTATTACG AACGTATTCG GTACACGTTT CTTACTAAGT TTACTTGTAA AGAGCCGTTA CTTCGATAAA AAACCAGGAT ACTTTGGTGT GAAACAAAAG GATATTATTC CGTTAACAAA AGGTGTAGTA CATCCACCAA CGAAATTTGA TCGTATTAAC TTTGTAAATG TCGGTCATAA ATTCCTTATC TTCTCGATTG TAGTTGTAAT TGCAGGTGCA ATTATTTTAC CAATTTTCAA AATGAATCTT GGTATTGACT TTGCGAGTGG TACACGTATC GACTTGCAAT CAAAACAATC AGTTACTGTG TCTGACGTTC ATAAAGATTT TAAAGAATTG AACATTGATG TGAAAGAAGA AAATATTGTA CCGACTGGAG ATGACAATAA AGGATTCGCA GTTCGTACAT TAGGTGTTCT ATCAAAAGAT GAAATTGCGA AAACAAAAAC ATTCTTCCAC GATAAATATG GTACAGATCC AAACGTAAGT ACAGTTTCAC CGACAATCGG TAAAGAAATT GCACGAAATG CATTTATCGC AGTATTAATT GCTTCTGCAG TTATCATTTT ATACGTAAGT ATTCGATTCC GATTTACGTA CGCATTATCT GCAGTACTTG CATTACTACA TGATGCATTC GTTATGATTG TTATATTTAG TATTTTACAA TTAGAGGTAG ACTTAACGTT TATCGCTGCG GTATTAACAA TCATCGGTTA TTCTATTAAT GACTCGATTG TTACGTTTGA TAGAAACCGT GAATTATACA AACAGAAAAA ACGAGTTCGT GATATAAAAG ACTTAGAAGA AATCGTAAAT GCAAGTATTC GCCAAACGCT TGGTCGTTCG ATTAACACCG TATTAACAGT GTTATTCCCA GTAATTGCAC TGCTTATCTT CGGTAGTGAG TCACTACGTA ACTTCTCGTT TGCGTTACTA GTTGGATTAA TTGTAGGTAC GTATTCTTCT GTTTTCGTTG CCTCTCAAAT TTGGTTAATG CTTGAAAACC GTCGTTTGAA AAAGGGTAAA AACAAGAAGA AGGTTGAGAA AGTAGAATCT GAACCGCAAG TATAA
|
Protein sequence | MAKRGTRIAA FFLIVLLIGG VIGAAGKDIA KGISLGLDLR GGFEILYEVK PAKKGDKIDR DVLVSTVGAL ENRVNVLGVS EPNIQIEGQD RIRVQLAGVQ DQQKAREMLS TQAKLTFRDV DDNLLMDGTD LKGGGAKQTF DEQGRASVGL TLKSAEKFRE VTEKISKMPP PTNLMVIWLD FEEGKDSYKA ESAKPNPKFL SAATVNQVFN QAEVSIVGGN FTVESAKQLS SLLNAGALPV DLKEMYSTSV GAKFGQQALE QTIFASAIGI ALIFLFMLVF YRLPGIVAVI MLGLYIFVTL LVFNWMHAVL TLPGIAALVL GVGIAVDANI ITYERLKEEL KIGKSMMSAF RAGNHRSLAT ILDANITTLA AAGVLFVYGN SSVKGFATSL IVSILVGFIT NVFGTRFLLS LLVKSRYFDK KPGYFGVKQK DIIPLTKGVV HPPTKFDRIN FVNVGHKFLI FSIVVVIAGA IILPIFKMNL GIDFASGTRI DLQSKQSVTV SDVHKDFKEL NIDVKEENIV PTGDDNKGFA VRTLGVLSKD EIAKTKTFFH DKYGTDPNVS TVSPTIGKEI ARNAFIAVLI ASAVIILYVS IRFRFTYALS AVLALLHDAF VMIVIFSILQ LEVDLTFIAA VLTIIGYSIN DSIVTFDRNR ELYKQKKRVR DIKDLEEIVN ASIRQTLGRS INTVLTVLFP VIALLIFGSE SLRNFSFALL VGLIVGTYSS VFVASQIWLM LENRRLKKGK NKKKVEKVES EPQV
|
| |