Gene BT9727_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_4028 
SymbolispH 
ID2856559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand+ 
Start bp4092430 
End bp4093380 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content38% 
IMG OID637515445 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_038346 
Protein GI49478601 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.000141031 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG TTAAAATTTC CCCTCGTGGT TATTGCTACG GTGTTGTGGA CGCGATGGTT 
ATTGCACGTA ACGCCGCATT AGATACATCA TTACCAAGAC CTATTTATAT TTTAGGTATG 
ATTGTTCACA ACAAACATGT AACAGATGCA TTCGAAGAAG ATGGTATCAT TACATTAGAT 
GGTCCAAGTC GATTAGACAT TTTAGATAAA ATCGATTCTG GTACTGTTAT TTTTACTGCA 
CACGGTGTTT CTCCAGAAGT TAAACAGCGT GCAAAAGAAA AAGGTTTAAC AACCATCGAT 
GCCACTTGCC CAGATGTTAC AAAAACACAT GACCTTATTG AAGCAAAGAA AGCTGAAGGT 
TACCATGTCA TTTATATCGG CAAAAAAAAT CATCCAGAAC CGGAAGGCGC AGTTGGTATC 
GCACCTGATA TCGTTCATCT TATCGAAAGA GCCGATGATT TAAAAACATT AGAAATTCCA 
ACGGATAAAA TTTTAGTTAC AAATCAAACA ACGATGAGTC AATGGGATGT GCAACATTTA 
ATGGAGGACA TTCAGAAAAA ATTCCCAACA GCAGAGTTCC ATAAGGAAAT TTGTTTAGCA 
ACTCAAGTTC GCCAAGAAGC TGTTGCCAAA CAAGCTGATG TTGCCGACTT AACAATTGTT 
GTTGGTGATC CGAAAAGTAA CAACTCAAAC CGTTTAGCAC AAGTATCACA AGAAATCGCT 
GGTACGAAGG CATACCGCGT TGCAGACGTA AGTGAAATTA AATTAGAATG GTTACAAGGT 
GTAGAAAACG TAGCTGTTAC AGCAGGTGCT TCTACTCCAA CACCAATTAC AAAAGAGGTT 
ATCGCTTTCT TAGAGCAATA TGACCCAATG AATCCCGCTA CATGGGAGAG AGTTCGAAAA 
GTACCGTTAC AAAAAATATT ACCTCGTGTA AAAGTGAAAA AAGAACAATA A
 
Protein sequence
MKIVKISPRG YCYGVVDAMV IARNAALDTS LPRPIYILGM IVHNKHVTDA FEEDGIITLD 
GPSRLDILDK IDSGTVIFTA HGVSPEVKQR AKEKGLTTID ATCPDVTKTH DLIEAKKAEG 
YHVIYIGKKN HPEPEGAVGI APDIVHLIER ADDLKTLEIP TDKILVTNQT TMSQWDVQHL 
MEDIQKKFPT AEFHKEICLA TQVRQEAVAK QADVADLTIV VGDPKSNNSN RLAQVSQEIA 
GTKAYRVADV SEIKLEWLQG VENVAVTAGA STPTPITKEV IAFLEQYDPM NPATWERVRK 
VPLQKILPRV KVKKEQ