| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_3634 |
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| Symbol | rluD |
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| ID | 2858759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | - |
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| Start bp | 3733498 |
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| End bp | 3734406 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637515052 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_037954 |
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| Protein GI | 49478436 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0043574 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG TAGTACAAGT AACAGTTGCA GAAGAACAAA AAAATGAGCG AATTGATAAA
TTCGTTGCAG GAATAAATAA TGAATGGTCA CGTACACAAG TACAGCAATG GATTAAAGAT
GACGTTGTAA CAGTTAATGG AAAAGCGGTA AAAGGGAATT ATAAAGTTAG AGAAGATGAT
GAAATTACAG TGACGATTCC TGAGCCAGAA GAGTTAGATA TTCAACCAGA AGATATGAAT
TTAGAAATTT ATTATGAAGA TGCAGATGTA CTCGTTGTTA ACAAGCCGCG TGGTATGGTT
GTACATCCAG CACCAGGTCA TACAAGTGGA ACGCTTGTGA ACGGTCTTAT GCACCATTGT
ACAGACTTAT CGGGTATTAA CGGTGTAATG CGTCCAGGTA TCGTGCATCG TATTGATAAG
GATACATCAG GCCTATTAAT GGTTGCTAAA AATGATATGG CACACGAATC ACTTGTAAAT
CAACTTGTAG CAAAAACAGT AACAAGACGC TACAAAGCGA TTGTACACGG TGTTATTCCG
CATGATAAGG GAACGATTGA TGCTCCGATT GCTCGTGATA AGAAAGAACG TCAAAGTATG
ACGGTTGATG AAAATGGTAA GCATGCTGTT ACGCATTTCC AAGTGTTAGA GCGATTCAAA
GATTTCACAC TTGTAGAATG TCGCTTAGAA ACAGGGCGTA CACATCAAAT TCGTGTTCAT
ATGAAATATA TTGGCTATCC ACTTGCAGGA GATCCAAAGT ATGGACCAAA GAAAACATTA
GACATGAATG GACAAGCACT TCACGCAGGC ATTTTAGGAT TTGACCATCC TCGTACTGGT
GAATATATTC AGTTTGAGGC ACCGATTCCA GAAGTGTTTG AAGATGCATT AAATATTTTA
CGAAAATAG
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| Protein sequence | MSEVVQVTVA EEQKNERIDK FVAGINNEWS RTQVQQWIKD DVVTVNGKAV KGNYKVREDD
EITVTIPEPE ELDIQPEDMN LEIYYEDADV LVVNKPRGMV VHPAPGHTSG TLVNGLMHHC
TDLSGINGVM RPGIVHRIDK DTSGLLMVAK NDMAHESLVN QLVAKTVTRR YKAIVHGVIP
HDKGTIDAPI ARDKKERQSM TVDENGKHAV THFQVLERFK DFTLVECRLE TGRTHQIRVH
MKYIGYPLAG DPKYGPKKTL DMNGQALHAG ILGFDHPRTG EYIQFEAPIP EVFEDALNIL
RK
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