Gene BT9727_3583 details

Gene Information

• Locus tag: BT9727_3583
• Symbol: rimM
• ID: 2854725
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus thuringiensis serovar konkukian str. 97-27
• Kingdom: Bacteria
• Replicon accession: NC_005957
• Strand: -
• Start bp: 3679046
• End bp: 3679561
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637515001
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_037903
• Protein GI: 49481628
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 3.00886e-22
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAAT GGTTTAACGT AGGAAAAATT GTAAATACTC ATGGCGTAAA AGGAGAAATT 
CGTGTGGTTT CTCGTACTGA CTTTCCAGAA GAGCGATATA AAGTAGGGAA TACGTTATAC 
ATATCGAATG AAAAAGGTGG AGAGCCTTTC CCAGTAAAGA TTACTTCTCA TCGTCAACAT 
AAAACATTTG ATTTATTGAC ATTTGAAGGA TACGGGAATG TAAATGAAGT AGAACAGTTT 
AAAGGTTCTC TTTTAAAAGT GCCTGAAGAT CAATTAGGTG AACTAGCTGA AGGTGAATAT 
TACTATCATG AAATTATTGG TTGCAATGTT GTAACGGAAG AAGGAGAAGC GTTAGGGACA 
ATAAAAGAAG TTTTATCTCC TGGTGCAAAT GATGTTTGGG TAATTAAACG TCCAAAAGGT 
CAAGATTTGT TAATTCCTTA TATTGATGAT GTTGTGCTTC AAGTTAACAT TGAGAATAAA 
TTAGTAACCA TTCATGTAAT GGAAGGGCTA CTATAA 

 

Protein sequence

MTKWFNVGKI VNTHGVKGEI RVVSRTDFPE ERYKVGNTLY ISNEKGGEPF PVKITSHRQH 
KTFDLLTFEG YGNVNEVEQF KGSLLKVPED QLGELAEGEY YYHEIIGCNV VTEEGEALGT 
IKEVLSPGAN DVWVIKRPKG QDLLIPYIDD VVLQVNIENK LVTIHVMEGL L