Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_3572 |
Symbol | xerC |
ID | 2854723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 3667656 |
End bp | 3668555 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637514990 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_037892 |
Protein GI | 49478402 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000000685052 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGTGA AGAAATTGTT ACAATTATTC GTTGGATATT TACAAATTGA AAGAAATTAT TCAAAATATA CAATTGCAAG TTATCAAAAT GATTTAGAAC ATTTTGTGCA ATTTATGGAG CGAGAAGGCA TATCCTCTTT TTTAGATATT ACATACGCGG ATGTTCGTTT GTACTTAACG ACGTTGCACG ATGAAAAGTT AGCCCGTAAA TCTGTCGCAA GAAAAGTATC AAGCTTACGA AGTTTATATC GTTTTTTGAT GCGTGAAGGT TATCGGAAAG ATAATCCGTT TGCACTTGCG TCACTCCCCA AAAAAGAATT GTCAATCCCA AAGTTTTTAT ATGCTGAAGA ATTAGAGGAA TTGTTTGAAG TTTCTGATAC GGAAACCCCG TTAGGTCAAA GGAATCAAGC TTTATTAGAA TTGATGTATG CGACTGGGAT CCGTGTGAGT GAATGCGTCA ATTTACAACT TACTGATATT GACTTTGCGG TGGGAACAAT TTTAGTAATG GGAAAAGGAA AAAAACAAAG GTATATTCCG TTCGGGAGCT ATGCACAAGA TGCTTTAATT ACTTATATAG AGAACGGGAG AAAACAGTTA GCCGAGAAAA CTGAAGAACA ATCTCATATG GTATTTTTAA ATGCGAAAGG GACGCCGCTG ACAAGTCGAG GGGTACGCTA TGTATTAAAT GAACTCATTA AGAAAGCTTC ACTGACAATG CGGATAAGTC CCCATATGTT AAGGCATACA TTTGCTACAC ATATGTTAGA TGAAGGGGCA GATTTACGTA CTGTACAGGA GCTACTCGGT CATGAAAATT TGTCGACGAC ACAAATTTAT ACGCATGTCT CTAAAGAAAG ATTGCGTTCT GTCTACATGA AGCATCACCC ACGGGCATAA
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Protein sequence | MNVKKLLQLF VGYLQIERNY SKYTIASYQN DLEHFVQFME REGISSFLDI TYADVRLYLT TLHDEKLARK SVARKVSSLR SLYRFLMREG YRKDNPFALA SLPKKELSIP KFLYAEELEE LFEVSDTETP LGQRNQALLE LMYATGIRVS ECVNLQLTDI DFAVGTILVM GKGKKQRYIP FGSYAQDALI TYIENGRKQL AEKTEEQSHM VFLNAKGTPL TSRGVRYVLN ELIKKASLTM RISPHMLRHT FATHMLDEGA DLRTVQELLG HENLSTTQIY THVSKERLRS VYMKHHPRA
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