| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_3468 |
|---|
| Symbol | gabP |
|---|
| ID | 2854644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 3552995 |
|---|
| End bp | 3554389 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637514886 |
|---|
| Product | gamma-aminobutyrate permease |
|---|
| Protein accession | YP_037788 |
|---|
| Protein GI | 49478342 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAAAA ATCTTAAGAA AGACCTCAAA ATACGCCACA TTACAATGAT CTCAATTGGC
GGCGTAATAG GAGCTGGTTT GTTTGTTGGA AGTGGGGCAG TTGTGCATTC AGCAGGACCA
GGTTCTATCG TTTCATATGC ATTAGCAGGA CTTCTAGTCG TTTTCGTTAT GAGAATGCTT
GGGGAAATGG CAGCTATTAA CCCGACAAGT GGGTCATTTG CAACATATGC AAGAGAAGCA
ATTGGTCCGT GGGCCGGTTA TACAATTGGG TGGCTATATT GGTTTTTCTG GGTAATTGTT
ATTGCGATAG AAGCCACAGC GGGTGCTGGT ATTATTCAGT ACTGGATTCC AGAAATCCCA
CTTTGGTTAT TAAGCTTAAT ATTAACGATT TTATTAACAT TGACGAATGT TTTTTCAGTG
AAATCATTTG GAGAGTTTGA ATATTGGTTT TCTTTTATTA AAGTAATAAG TATTGTTTTG
TTCCTTTGTC TTGGACTAGC TGTTATTTTA GGATTTGTAC CAGGAACGGA AGCACCTGGC
ACTTCGAACT TAGTGGGGCA AGGAGGATTT ATGCCAAATG GTATAAGTTC GGTGCTACTT
GGAATTACTG TCGTTATATT TTCATTTATG GGATCAGAGA TTGTAGCGGT AGCAGCTGGT
GAGTCTGCAG AACCTGTAAA AGCAGTAAAA ACAGCAACAA ATAGTGTAAT TTGGCGTATT
CTCGTATTTT TCATTGGATC TATCGCTGTA GTTGTTACAC TTCTTCCGTG GAATTCAGCA
AACATACTAA AAAGTCCGTT TGTAGCGGTG CTAGAACATA TAGGGATACC AGCGGCAGCG
CAAATTATGA ATTTTATCGT TTTAACAGCT GTACTTTCTT GTTTAAATTC TGGTTTATAT
ACGAACTCAA GAATGCTTTT TTCAATGGCA GAAAGAGGAG ATGCTCCAAA GGCGTTCTTG
AAATTGAACA GTAGTGGTGT TCCAGTTCGG GCCGTTTTAT TCGGAACGTT CTTCGCTTAT
ATTGGAGTTG TTTTTAGTTA CATATCTCCA GATAAAGTCT TTTTATTTTT AGTGAATGCC
TCTGGCGGGA TTGCGTTACT CGTTTATCTC GTTATAGCTA TTTCGCATTT AAAGATTCGT
AAAAAAATGG GAAGAGTAGA ACAACAAAAT TTGAAAGTGA AAATGTGGTT TTTCCCGTAT
GTGACGTATG TTACAATTGC AGCTATTATA GCAGTTTTAA TTGCGATGCT TGCCATTGAA
TCTTTACGTT CACAAGCACT TTTGACGATG CTTGTTACTG TTCTTATAAT CATTTCTTAT
TTTATTTTTA ATAGAAATAA AAATAGTACA GTGTTGAATA CTAAAAGTAA GAATGAGGAA
TCTGTCCGAT TTTAA
|
|---|
| Protein sequence | MDKNLKKDLK IRHITMISIG GVIGAGLFVG SGAVVHSAGP GSIVSYALAG LLVVFVMRML
GEMAAINPTS GSFATYAREA IGPWAGYTIG WLYWFFWVIV IAIEATAGAG IIQYWIPEIP
LWLLSLILTI LLTLTNVFSV KSFGEFEYWF SFIKVISIVL FLCLGLAVIL GFVPGTEAPG
TSNLVGQGGF MPNGISSVLL GITVVIFSFM GSEIVAVAAG ESAEPVKAVK TATNSVIWRI
LVFFIGSIAV VVTLLPWNSA NILKSPFVAV LEHIGIPAAA QIMNFIVLTA VLSCLNSGLY
TNSRMLFSMA ERGDAPKAFL KLNSSGVPVR AVLFGTFFAY IGVVFSYISP DKVFLFLVNA
SGGIALLVYL VIAISHLKIR KKMGRVEQQN LKVKMWFFPY VTYVTIAAII AVLIAMLAIE
SLRSQALLTM LVTVLIIISY FIFNRNKNST VLNTKSKNEE SVRF
|
|---|
| |