Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_3458 |
Symbol | hfq |
ID | 2854846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 3543745 |
End bp | 3543969 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637514876 |
Product | RNA-binding protein Hfq |
Protein accession | YP_037778 |
Protein GI | 49479437 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000000000000205772 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAT CAATCAATAT TCAAGATCAG TTTTTAAATC AACTCCGTAA AGAGAATACG TTTGTTACGC TGTACTTATT AAATGGTTTC CAGCTTCGTG GATTAATTAA AGGATTTGAT AATTTTACAG TCCTACTGGA AACAGAAGGT AAGCAACAGC TTATTTATAA ACATGCAATT TCTACATTCG TACCACAAAA AAATGTTTCA ATTGAATTAG AGTAG
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Protein sequence | MKQSINIQDQ FLNQLRKENT FVTLYLLNGF QLRGLIKGFD NFTVLLETEG KQQLIYKHAI STFVPQKNVS IELE
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