Gene BT9727_3371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_3371 
Symbol 
ID2857214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp3453008 
End bp3453649 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content35% 
IMG OID637514791 
Productpolysaccharide deacetylase 
Protein accessionYP_037693 
Protein GI49478297 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID[TIGR02764] polysaccharide deacetylase family sporulation protein PdaB 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTCA GAAAAGAGCT AGAACCAACT GGCTATGTAA CATGGGAAGT ACCTAATAAT 
GAAAAGATTA TCGCCATTAC ATTTGATGAT GGACCAGATC CAACTTATAC ACCACAAATT
TTAAATTTAT TACGTCAATA TAAAGCAGAA GCGACATTTT TTATGATCGG ATTTCGAGTT
CAGCGTAATC CATATTTAGT GAAACAAGTG TTAAAAGAAG GACATGAAAT TGGAAATCAT
ACGATGAACC ATTTGTATGC GAGTAATTCT TCAGATGAAA AATTAGAAAA CGATATTTTA
GATGGAAAGA AATTTTTCAA AAAATGGGTG AAAGAACCTT TACTATTCCG TCCACCTGGC
GGATATATTA ACGATGCTGT ATTTAAAACA GCGAAAGAAG CTGGTTATCA AACTGTTCTA
TGGTCGTGGC ATCAAGATCC ACGTGATTGG GCAAATCCAG GGGTTGAATC CATTGTAAAT
CATGTATTGA AAAATGCTAA AAGTGGCGAT ATTGTATTGT TACATGATGG AGGAAATAAT
CGTAGTCAAA CAGTAGCAGC GCTAGCAAAA ATTTTACCTG AACTGAAAAA GCAGGGCTAT
CGATTTGTAA CGGTTTCGGA ATTATTACGT TATAAACATT AG
 
Protein sequence
MLLRKELEPT GYVTWEVPNN EKIIAITFDD GPDPTYTPQI LNLLRQYKAE ATFFMIGFRV 
QRNPYLVKQV LKEGHEIGNH TMNHLYASNS SDEKLENDIL DGKKFFKKWV KEPLLFRPPG
GYINDAVFKT AKEAGYQTVL WSWHQDPRDW ANPGVESIVN HVLKNAKSGD IVLLHDGGNN
RSQTVAALAK ILPELKKQGY RFVTVSELLR YKH