Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_3177 |
Symbol | sdaC |
ID | 2855518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 3249868 |
End bp | 3251187 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637514598 |
Product | serine transporter |
Protein accession | YP_037500 |
Protein GI | 49478476 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00205118 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGGA ATACTGCAAA GAAAATAGAA GTTCAAGCTG AAAATAACGC ACTAAAAAAT GAGCAATATG CAGATCCGAA AAAGTGGCAT AAGCAGGATA CTACATGGGC ACTCAGTCTA TTTGGAACTG CAATTGGAGC AGGGGTGCTC TTTTTACCGA TTAATGCAGG TTCAGGTGGT TTATTATCAT TACTACTAAT TACATTGCTT GCATATCCAG TTATGTATTA CTCACATAGG GCACTTGCGA AAATGATATA CGCTTCTAAT TCTGCTGATG AGGGGATCAC AGGTACAATT AGAGAGTATT TCGGAAATAA AGCGAGTATC ATTTTTAACA TCGTATATTT CGGTTCAATT TATACAATCG TACTAATGTA TTCGGTTGCG CTTACAAATA CTGCAAGTAG TTTTATCGTG CATCAATTGA ACATGCCAGA ACCTCCAAGG GCTATTTTAT CACTTGTATT AGTTCTTGGT CTTATCGCTA TACTGAACTT TGGTCAAGAT ATTACTGTAA AGGTAATGAG TATGCTAGTG TATCCTTTCA TAGCTTCTCT ACTGTTTATT GCAATATCTT TAATTCCACA GTGGAATACG TCAATGCTTA GCTTTTCAGC TGTTTCTACT GCTTCAACAG GAACAGGCTA TTTTGGAACG ATATTGATGA TTTTACCAAT CATCGTATTC TCATTTAATC ATTCACCTAT GATTTCATCA TTTGTTGTGA AACAGAGAGC TACGTATGGA ATAGAAGCTA CTGATGCGAA ATGTGCGCAA ATACAAAAAG TTTGTTATAT TATGACATTC GTTGTAGTTA TGTTCTTCGT TTGGAGTAGC GCACTGAGCC TGACTCCAGA TGATTTAAAA ATGGCAAAAG AGCAAAACTT ATCAATTCTT TCTTACCTTG CTAATGAGCT TAATTCACCT GTAATCACGA TTGCAGCTCC AATCATTGCT TTTGTGGCTA TTACAAAGTC TTTCCTTGGC CATTATATCG GAGCGTTTGA AGTAATGCGT GACATGATTA TTAAGTTTGG TAAATCACGT GGAAAAGTAA TCGAAGAAAA AACAATTAAG ACAATCGTCC TTACTTTTGT TGTATTATCA TGCTGGTTTG TTGCTTATAC AAATCCAAGT ATTCTTGGAC TTATTGATTC TCTAAGTGGT CCATTAGTTG CGGCTATCTT ATGTCTATTA CCGATGTATG CGATTCAAAA AGTCCCAGTA TTAGCTAAGT ATAAAGGGAA AATGAGTAAC GTATTTGTTA TTATTGTAGG TGTGCTTACT GTTTTAGCAA GTATTAAATC ATTATTCTAA
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Protein sequence | MNGNTAKKIE VQAENNALKN EQYADPKKWH KQDTTWALSL FGTAIGAGVL FLPINAGSGG LLSLLLITLL AYPVMYYSHR ALAKMIYASN SADEGITGTI REYFGNKASI IFNIVYFGSI YTIVLMYSVA LTNTASSFIV HQLNMPEPPR AILSLVLVLG LIAILNFGQD ITVKVMSMLV YPFIASLLFI AISLIPQWNT SMLSFSAVST ASTGTGYFGT ILMILPIIVF SFNHSPMISS FVVKQRATYG IEATDAKCAQ IQKVCYIMTF VVVMFFVWSS ALSLTPDDLK MAKEQNLSIL SYLANELNSP VITIAAPIIA FVAITKSFLG HYIGAFEVMR DMIIKFGKSR GKVIEEKTIK TIVLTFVVLS CWFVAYTNPS ILGLIDSLSG PLVAAILCLL PMYAIQKVPV LAKYKGKMSN VFVIIVGVLT VLASIKSLF
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