| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_3111 |
|---|
| Symbol | |
|---|
| ID | 2853791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 3179718 |
|---|
| End bp | 3181337 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637514532 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_037434 |
|---|
| Protein GI | 49478176 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5632] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0000635651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTA AATTGAATAA AAAAGTAGTA GCATTAACAG CAGGACTAAC GGTATTATCT
TCATCGATGG TATCGTTCGC AGAAGAACAG CCATCTGTAA ATAACCATCA ATCTATAAGT
ATTCAGGAAC AAAGCGGGAC AGATCAACTT CAAGTATCAG AAGAACAAGT TTTAAAAAGT
ATTGAAGAAA GTTTTGAAGG GGTAGATGGA CGCGGTGGAG GTACTGTCAA TAATAAGAAA
GTGGACAGTC TTCAAAGTTC AGAAGGTATT TATGAAGAAA CGGGTACATT AACGGTTCCT
CACAATTCAA ATAGAACAAA GCGTAGTCTT GCTTTCTCAG CACCTACAGT TTCTAGTACG
ATAAACGGGG TTCCATTCAC GGAATGGATT GTTCCAACAG GTAACGATAA TATTCGCCCT
CAAAATCATA TGATTCCAAA GTATATTACA ATTCATGAGA CTGATAATAA AAGCGTAGGA
GCAGGAGCTA AAAGCCACGC TCAATACTTA TATAACCAAG CAGTAGGAGA AACAGACCGA
GCTGCATCAT GGCACTTTAC AGTAGATGAT AAAGAAATTT ATCAACACTT ACCATTGAAC
GAGAATGGAT GGCACGCAGG AGATGGTGAT GGGCCGGGTA ATAGAGAATC TATTGCAATT
GAAATTGCAG TTAATAGTGA TGGTGACTAC AATAAGGCAG TCGATAACGC TAAGAAACTT
GCAGCTTATT TAATGAAAGA AACGGGTGTA CCATTAAACA ACATCGTAAA ACATCAAAAA
TGGAGTGGTA AAAACTGTCC CGATATGTTG ATTAATAGTG GACAATGGGT ACCATTCGTA
AATGGCATTG AAGGATATTA TAATAAATTT TATCAACCGA CAGATGATAT AACAGGAGGT
TGGTATGAAT CGGCTATTCG TGATTTGAAC AGAAGAGGTA TTATGGTAGG AGAAGGAAAC
GGCATTTTTG CGCCTAATAG ATCTGTAACA AGAGCTGAGT TTGCGCAATT AATCTCGAAT
TCTTTAAGTC TTCCAGCTGG AGATGCGACG TTTAAAGATT TAAATGATGT AAATTCAACT
TTACGAGATG GTATTAAACG TACTGCAAGT GCAGGCATCA TTTCTGGTAG AGGAGACGGT
AATTTTGACC CTAACACACC TATTACAAGA GAAGAAGCAG CGGTTATTGT AAATAAAGCT
TTACAGTACA AAGGAATAAA TGGACCATTG GTAAACTTAC CATTTACAGA TAAAGGTCAA
ATTATCTATA AAGAAGCTGT ACAAAGATTA TACGGCTTAG GTATTGTAAC AGGTATGGGA
GATAACCTAT ATGTCCCTAA AGGAACAACA ACTCGTGGTG AAACTGCAGC ATTCATTTTA
AACATGCTTC AAGTTATTGA AACTGGGAAT GTTCAAAAAG GAATTGGTAC GGTTGAAATA
AATGGTATTG GAGTAAATGT TCGCAGCGGA GCAGGATCTA GCTACTCTGT TGTTAGAAAA
GCAAGCAAAG GTGAAAAAGC TACAGTATAC GAAGAAAAGA ATGGTTGGCT AAGAATTGGT
ACAGGTGAGT GGGTTTATAA TGAGCCTAGC TACATCGTCT ATACGAAAGA TAAAAATTAA
|
|---|
| Protein sequence | MSIKLNKKVV ALTAGLTVLS SSMVSFAEEQ PSVNNHQSIS IQEQSGTDQL QVSEEQVLKS
IEESFEGVDG RGGGTVNNKK VDSLQSSEGI YEETGTLTVP HNSNRTKRSL AFSAPTVSST
INGVPFTEWI VPTGNDNIRP QNHMIPKYIT IHETDNKSVG AGAKSHAQYL YNQAVGETDR
AASWHFTVDD KEIYQHLPLN ENGWHAGDGD GPGNRESIAI EIAVNSDGDY NKAVDNAKKL
AAYLMKETGV PLNNIVKHQK WSGKNCPDML INSGQWVPFV NGIEGYYNKF YQPTDDITGG
WYESAIRDLN RRGIMVGEGN GIFAPNRSVT RAEFAQLISN SLSLPAGDAT FKDLNDVNST
LRDGIKRTAS AGIISGRGDG NFDPNTPITR EEAAVIVNKA LQYKGINGPL VNLPFTDKGQ
IIYKEAVQRL YGLGIVTGMG DNLYVPKGTT TRGETAAFIL NMLQVIETGN VQKGIGTVEI
NGIGVNVRSG AGSSYSVVRK ASKGEKATVY EEKNGWLRIG TGEWVYNEPS YIVYTKDKN
|
|---|
| |