| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2886 |
|---|
| Symbol | gerIC |
|---|
| ID | 2854927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 2950428 |
|---|
| End bp | 2951507 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637514308 |
|---|
| Product | GerC family spore germination protein |
|---|
| Protein accession | YP_037210 |
|---|
| Protein GI | 49478006 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02887] germination protein, Ger(x)C family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.0825942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAT GGATACTTTT CCTTATAGTA AGTGTCTTCT TAATAGGTTG TGCTAAAACG
AAAATTGTGG ATGACATTGA CTTAGTTCAA GTTGCGGCAT ATGATACCGA AGCAAAAGGT
AAGCTAAAAG GAACCTTTGC GATTTCAGCT TATAAAGGAG GCGGGGAAGG TGAAACGAAA
ATCTATTCAG CATCAGGCCA GACTGGTAGA GAAGTTCTTG CAAGAGCATC CGAAAAATCT
TCTGGACCTC TAGAGTTGGG GCAATTGCGT GTTATTATAT TTAATGAAAA AATAATTGAT
AAGGGAATGC AGGAAATTTT AGAGACTTTG AATCGAAATC CTAGTGTAGG AAATGCAATT
TATTTAGCAA TTACAAATGT AAAAGGGGAA TCACTATTAA AGGGGAATTA TTCTGAAGAA
AAAGAAATTG CTTCCTATCT ATCCTCTTTA CTGGAGCAAA ATATGGATAA TGGAACGCAG
CCAAAAACAA ATTTTTTTAT GTTTTTAAAC CAACTTAATG ATGATGCGAG AGATTCATAT
TTACCGATAA TATCTAAAAA AGGTAATGTG TTGGAGTTAG ATGGAATAGC ACTTTTTAAA
AGATGTAAAA TGGTTGATAA AGTAAACCCT AAAGATTTAT TTGTATTTAA ATTGTTGACA
GATAATTTTA AACAAGGTAC ATACCAATTC AAACTACCTG GTTCCTCAAA TACTTACGCC
ACGATAGAGA ATATAAAAGC TAGAACAAAA TATAAGATGG AGGGGAATAG TAAGCATCCA
TTCGTAAATG CTCATATTCA AGTTAAAGCT GAAATTCAAG AATTTACAAA AACAAAAAAT
CTAGATAATC CTAAAGAAAT AAAAAAATTA GAAAAAATTA TGGAAAAAGA AATAGAAAAA
AAAGCAACTA CATTGATAAA GAGATTTATT AAAAAAGACA CAGATCCTAT AGGACTTAGA
AAGCTTGGTA GAACTCACGT AAGAAAATGG AACAGTCAAG AATGGGAAGA ATCCTATAAA
CATTTACGTT TTCGTGTAAC AGCTGATGTA AAAGTAACCC AATCTGGTGT TACAGAATAA
|
|---|
| Protein sequence | MKRWILFLIV SVFLIGCAKT KIVDDIDLVQ VAAYDTEAKG KLKGTFAISA YKGGGEGETK
IYSASGQTGR EVLARASEKS SGPLELGQLR VIIFNEKIID KGMQEILETL NRNPSVGNAI
YLAITNVKGE SLLKGNYSEE KEIASYLSSL LEQNMDNGTQ PKTNFFMFLN QLNDDARDSY
LPIISKKGNV LELDGIALFK RCKMVDKVNP KDLFVFKLLT DNFKQGTYQF KLPGSSNTYA
TIENIKARTK YKMEGNSKHP FVNAHIQVKA EIQEFTKTKN LDNPKEIKKL EKIMEKEIEK
KATTLIKRFI KKDTDPIGLR KLGRTHVRKW NSQEWEESYK HLRFRVTADV KVTQSGVTE
|
|---|
| |