Gene BT9727_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_2596 
Symbol 
ID2856711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp2670965 
End bp2672626 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content37% 
IMG OID637514019 
Productsigma-54-dependent transcriptional activator 
Protein accessionYP_036921 
Protein GI49479096 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.491073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTCT CATTTCCCAC AATAAAAGAA TTTCTAAAAA CATTATCTAT TGATCATACA 
TATAGCACTC AACACATTGA ACAAGTTGAC GAAAAATTTT ATTACCGACC TTCTACTACA
GAAGAATATA ACTGTGCAGT TATATATGAA GATGATTCGT TCACCACTTT AATTGACGGG
GTTTCCAATG AACTAGCCGT TATCATATTG AACCGAAATA AAGAGCCTAT ATGCTGTATA
ACAGCACAGC AAATCATTCC GTTTCTTGTT AAGTCTTACA ATGAACTCCA ATCTTTTTAT
AACACCGTAA TACAAACTAC TGATTCTTCT GTTACAGTCA TCGATGATAA AGAATGCGTT
CGTACCTGGA CAGATGGCGC CGAAAAGATT TTTTCAGTCA AGCATAATGA AATTATCGGG
CAACCTATCA CTCGCTTTTT TGACTATAAA GATTTGGAAA TTTTGCAATC ATTACATGAC
GGAAAAAGCA TAATCGCTCA GTTCCATCAA CCTCGGCCTG ATCTGTTCGT ATTAATTAAT
TCAAACCCAG TTTATTGTAA CGATGAAATT ATAGGAGCAG TTGTCTCTGA AACTGATGTT
ACGAATCAAG TCGCTTTAAA TGAAAAACTA TTTAATATGT CACATGAAAT GCACCGTTTA
GAACAAGAGG TCGCAAAGTA TAAAGATGAA TCAGACCCTT TCCTTGCGAT GAATGGAAAG
AGCTCCGTTA TACAAAGAAC GATCCAATTA GCTAGAAAGG TTTGTTCGGT GAAATCAACT
GTTTTAATAC TCGGCGAAAG TGGTGTTGGA AAAGAAGTAT TTGCGAAAGC AATTCATGAT
GCAAGTGAAG CAGCTAAAGC TCCGTTCATT TCAATTAACT GCGGCGCAAT TCCAGAAGCA
TTATTTGAAA GTGAATTATT CGGCTATGAG CGCGGGGCGT TTTCTGGTGC AAATAGCAAA
GGGAAAAAGG GTAAAATAGA GCTCGCGCAA GGCGGCACAT TATTCCTTGA TGAAATAGGC
GAAATGCCGC TCGATATGCA AGTAAAACTT TTACGTGTAC TACAAGAAAG AAAATATTAC
CGAGTTGGTG GAGAAAAAGA GATTCATATT GATTTTCGTA TTATCGCTGC TACAAATCGT
GATTTACAAG AAGAAATGAA AAAAGGCACG TTCCGAGAAG ATTTATACTA TCGTCTAAAT
GTCGTTAGCT TGCATATTCC ACCGCTGCGG GAAAGACGCG AAGATATCAT TGAATTAACC
TACTCTTTCT TAAACGATTT TTCAATCAAC TATAACAGAC CAATTCGCGA CTTACCGTCC
AGCATTATGC ATGAACTGCT TCATTACAAT TGGCCAGGTA ATATTCGCGA GCTCCGTAAC
GTTGTTGAAA GACTTGTTGT ATTTGCGACT GACGGTATTA TAAAACAAGA ATATTTACCA
TTTCATACAA CTGAAACTTT AGAGGAACAT TCGGCTCATT CCCTATTACT CAGCAACAAT
AATACAATCC TCTCTTTACA AGAAGAGATG GAGGAACATG AGAAAAAAGT CATTGAGAGG
GCTTTACGCA TTTTGAATGG GAATAAATTA GAATGTGCGA AACAGCTTGG TGTTACGAGG
GCCACTTTAT ATAACCGTTT AAAAAAACTT GGATTACAAT AA
 
Protein sequence
MAFSFPTIKE FLKTLSIDHT YSTQHIEQVD EKFYYRPSTT EEYNCAVIYE DDSFTTLIDG 
VSNELAVIIL NRNKEPICCI TAQQIIPFLV KSYNELQSFY NTVIQTTDSS VTVIDDKECV
RTWTDGAEKI FSVKHNEIIG QPITRFFDYK DLEILQSLHD GKSIIAQFHQ PRPDLFVLIN
SNPVYCNDEI IGAVVSETDV TNQVALNEKL FNMSHEMHRL EQEVAKYKDE SDPFLAMNGK
SSVIQRTIQL ARKVCSVKST VLILGESGVG KEVFAKAIHD ASEAAKAPFI SINCGAIPEA
LFESELFGYE RGAFSGANSK GKKGKIELAQ GGTLFLDEIG EMPLDMQVKL LRVLQERKYY
RVGGEKEIHI DFRIIAATNR DLQEEMKKGT FREDLYYRLN VVSLHIPPLR ERREDIIELT
YSFLNDFSIN YNRPIRDLPS SIMHELLHYN WPGNIRELRN VVERLVVFAT DGIIKQEYLP
FHTTETLEEH SAHSLLLSNN NTILSLQEEM EEHEKKVIER ALRILNGNKL ECAKQLGVTR
ATLYNRLKKL GLQ