Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_2552 |
Symbol | |
ID | 2855130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 2633846 |
End bp | 2634532 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637513976 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_036878 |
Protein GI | 49479125 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.00135322 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGCACAA AAGTAACTCA TATTTTGAAA AATCATATCG ATATGAATCA TTCAAATATA ACTTTTTTAA TTGAGCAATA CGGAGAGTTG AAAAGATACT GTACATTTTT AACGAAAAAT AAATGGGATG GCGAAGATCT TGCCCAAGAA ACAGTTTGTA AAGTGCTTCA AAAATATAGT AATAAAGATA TTTGTATGAC GCTCGTATAT AAAATAGCTA GAAATCGTTG GTTAGATCAA ATAAAGTCAA AATCAGTTCA TGAAAAAATA AGAGACCAAA TTACTTTTGA AGAACCACAT GAAAAAATTG CAGATTTGCA TGAAATGGTA GGGAAAGTGT TATCTTCATT AAATGTACAG CAATCCGCAA TTTTATTATT AAAAGATGTT TTTCAATATA GTATCGCTGA TATTGCTAAA GTATGTTCCG TATCGGAAGG GGCAGTAAAA GCTTCTTTGT TTCGGAGTAG AAATAGGTTG AAAACTGTAA ATGAAGAAGG GATAGAGATA GTTGAATTCA CAGATGATAT GGAAGTTGTA GTAACGTCTA TTCGAGAAGA GAGACCGGAA TTATTAACGA AACTGCTTCC AACAATAGAT TTTACTAAGT TACCATCTAA ACAGCCAGTC TTATTATTTA ATGTGAAACA ACCTTCTTCC TACAGTTGTA TGCTTTGCGT TGCATAA
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Protein sequence | MCTKVTHILK NHIDMNHSNI TFLIEQYGEL KRYCTFLTKN KWDGEDLAQE TVCKVLQKYS NKDICMTLVY KIARNRWLDQ IKSKSVHEKI RDQITFEEPH EKIADLHEMV GKVLSSLNVQ QSAILLLKDV FQYSIADIAK VCSVSEGAVK ASLFRSRNRL KTVNEEGIEI VEFTDDMEVV VTSIREERPE LLTKLLPTID FTKLPSKQPV LLFNVKQPSS YSCMLCVA
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