| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2341 |
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| Symbol | vanR |
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| ID | 2855680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | - |
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| Start bp | 2432094 |
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| End bp | 2432789 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637513765 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_036667 |
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| Protein GI | 49479219 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000000166477 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAA ATATATTAAT TATTGATGAT GATAAAGAAA TTGTCGAATT ACTTGCTGTT
TATTTGCGAA ATGAAGGCTA TAACATTTAT AAAGCATATG ATGGTGATGA AGCATTACAA
ATGATTTCTA CATATGAAGT TGACCTTATG ATTTTGGATA TTATGATGCC AAAACGAAAT
GGATTAGAAG TTTGCCAAGA AGTTCGTGAA AATAATACTG TACCTATTCT TATGCTGAGT
GCAAAAGCAG AAGATATGGA TAAAATATTA GGACTTATGA CAGGCGCCGA TGATTATATG
ATTAAACCAT TTAATCCATT AGAATTAGTA GCTAGAGTGA AAGCTTTGCT TCGACGATCA
TCTTTCCAAA ATGCTTCTTC TCCCAAAAAT GAAGATGGTA TGATTCGCAT TCGTTCCGCT
GAAATACACA AACATAATCA TACTGTGAAA GTAAATGGCG AATATATTAA GCTTACATCT
ATTGAATTTG ATATTTTATA TTTACTTGCG AGTAATACAG GAAGAGTATT TAGTTCTGAA
GAAATATTTG AGCGTGTTTG GAATGAAGAT GGTTATGGTT CAAATAAAAC TGTAATGGTC
CACATTAGTA ATTTACGAGA TAAGCTTGAA ACAGGAATGA ATGGAGAAAA ATTTATTCAT
ACTGTTTGGG GAGTAGGCTA TAAAATTGAG AAATGA
|
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| Protein sequence | MNKNILIIDD DKEIVELLAV YLRNEGYNIY KAYDGDEALQ MISTYEVDLM ILDIMMPKRN
GLEVCQEVRE NNTVPILMLS AKAEDMDKIL GLMTGADDYM IKPFNPLELV ARVKALLRRS
SFQNASSPKN EDGMIRIRSA EIHKHNHTVK VNGEYIKLTS IEFDILYLLA SNTGRVFSSE
EIFERVWNED GYGSNKTVMV HISNLRDKLE TGMNGEKFIH TVWGVGYKIE K
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