Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_2304 |
Symbol | cpdC |
ID | 2858601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 2391766 |
End bp | 2393718 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637513728 |
Product | 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
Protein accession | YP_036630 |
Protein GI | 49477742 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.199314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAA TGAAATGGAA GAACTATTTA TGTTATTTTG TTATTCTTAT ACTTCTTGGA ACAGCAGTAA CAGTCAAACC ATCTATCTCG AAAGCTGAGG AATCTGATGT TAATATTACA CTGTTAGGTA CTGCAGATAT TCATGGTAGA TTTATGCCTT GGGATTATGC GCTTGATGGT GCAAATACGA GTGGAAGTTT AACGCAGCTT TATACGGTTA TAAAGAAGGT GCGTCAGGAA AATCCCAATA CCATATTAGT AGATGCTGGG GATACAATTC AAGGAAATTC AGTAGAGTTA TTCAATGATC AGCCGCAATC GCCAATAATG GTAGCGATGA ATGCAATGGG ATATGATGCC TGGGCATTTG GAAATCATGA ATTTAACTTT GGATTAGATA CGTTGAAAAA AGTTAGTGAG CAATATAAGG GAAAGACATT AGCAGGAAAT ATTTATAAGG AAAATGGAGA GCGCTTTCTT CCTGCATATA CGATTGTTGA AAAAGGTGGA ATTAAAGTTG GGATTATTGG TATGAATACA CCAATGATTA GTGATTTCGA AAAAGGGACA GATCATTTGG ATGGATTGGT AGTGAAAAAT CCAGTAGAAG AGACAAAAAA GGCAATTAAA GAATTAGAGG GTAAAGTAGA TGTAATGGTA GGGGTTATGC ATATGGGATT AGAAAATGAG AATGGAATCC CTGGTACTGG GGTTCAAGAT ATTGCGAATG CTTGTCCGGA ATTAAGTGCT ATTTTTGCAG CTCATATGCA TAAGCTTGTA AAAAAAGAAG TTGTAAATGG TGTCATTATC ACGGAACCAG ATAAATATGG AACACATATC TCACGTATTG ACCTTACTTT TACAAAGCAA GATGGGAAGT TGGTTTTAAA AAATAAAGCC GCTACCGCTA TACCTGTAAA AAATACTGAT GGAACAACAG TAGTATCTGA TCCTACACTT GAAGACACAC TGACACCTTT TCACGAGTAT GCGAGGGGAG ATGCAAATGT TATAGTCGCT CAATTAAAGG GTAGAAACCT TGTTCCTGAA AATGAAATAA AGGGTATTCC AAGTGTGCAG ATTCAAGAGA CACCTTTATC AGATTTCTTT CATGAGGTCA TGCTCTATTA CAGCAAAGCA GATGTAGTAG CTCATCAAAT TGATAACGAT AATGCCCGTT TGGATGTAGG TCCTATTAAG AAAAAAGATA TTGCATATAA TTATCAATAT GCTTTGGGTG AAATTACGGT ATATAAGGTA ACTGGGAAAG ACTTAAAAGA CTATATGGAA TGGGCAGCAG GGTACTTTAA TTCATCTCGT CCTGGAGATG TAACAGTTAG TTTTGATAAA ACCCGTCGTG CGTCTAAATA CAGTACGAAT GATTTCTTTG GAGGCGTAAA ATACGAAATT GACTTAACAA AACCATATGG AAGTAGAATT ACAAATTTAC ATTCTATTCG TACAAATAAA CCAATCAAAA CGAACGATGT TATGACGCTG GGAATGAATG CATATAGAAT GGAGGCTCTT CAGGCAAAAG GTGGAGCTTT AGAGGGGCGT AAGTTTGAAC AAATTTGGTC ATCTAAACAA GAGAATGCAT TCGGGGAAAC TGGTGGAACC ATTCGTAATC TTGCTATTAC ATATTTAAAA GAGGTGAAGA ACGGTGTTTA CACACCAAAA GTTATGCATA ATTGGAAAAT TACTGGCGTG AATACACATT CTTCAGAGCA TAAGGCTGTA GTAGATCTTG TGAATAAAGG GATTTTAGAA ATTCCAAAAA CTGAAGATGG AAAATATACA AACATAGCAT CTATAAATAC TAAAGATTCA ATTACAAAAG AGGAAATTGT CGCACTCTCA CAAAAAGTAA ATATTAATCC AAATCAGTTT AAGCATATAA AAACGAAAGG TGAATTTTAC AAAAAACTTA GTAGAATTGT AAAAAAAATA TAA
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Protein sequence | MQKMKWKNYL CYFVILILLG TAVTVKPSIS KAEESDVNIT LLGTADIHGR FMPWDYALDG ANTSGSLTQL YTVIKKVRQE NPNTILVDAG DTIQGNSVEL FNDQPQSPIM VAMNAMGYDA WAFGNHEFNF GLDTLKKVSE QYKGKTLAGN IYKENGERFL PAYTIVEKGG IKVGIIGMNT PMISDFEKGT DHLDGLVVKN PVEETKKAIK ELEGKVDVMV GVMHMGLENE NGIPGTGVQD IANACPELSA IFAAHMHKLV KKEVVNGVII TEPDKYGTHI SRIDLTFTKQ DGKLVLKNKA ATAIPVKNTD GTTVVSDPTL EDTLTPFHEY ARGDANVIVA QLKGRNLVPE NEIKGIPSVQ IQETPLSDFF HEVMLYYSKA DVVAHQIDND NARLDVGPIK KKDIAYNYQY ALGEITVYKV TGKDLKDYME WAAGYFNSSR PGDVTVSFDK TRRASKYSTN DFFGGVKYEI DLTKPYGSRI TNLHSIRTNK PIKTNDVMTL GMNAYRMEAL QAKGGALEGR KFEQIWSSKQ ENAFGETGGT IRNLAITYLK EVKNGVYTPK VMHNWKITGV NTHSSEHKAV VDLVNKGILE IPKTEDGKYT NIASINTKDS ITKEEIVALS QKVNINPNQF KHIKTKGEFY KKLSRIVKKI
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