| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2274 |
|---|
| Symbol | |
|---|
| ID | 2857212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 2357518 |
|---|
| End bp | 2359857 |
|---|
| Gene Length | 2340 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637513698 |
|---|
| Product | ABC transporter, permease |
|---|
| Protein accession | YP_036600 |
|---|
| Protein GI | 49477720 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000117587 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGGA GAATGATAAA AAGAGATTTC TCTCAAAATA AAATGATAAT TACCATCTTG
TTTATGTTTA TCATGTTATC AAGTCTTTTA ATGGCTAGTG CTTCAAGTAA CGTTATTACT
CTATTGAACT CAATGGATCA ATTGGTTAAA GTATCAAACG CACCGCACTT CGTACAAATG
CATGCCGGAG AGGTAAATCA AAAGTCAATT GATTCCTTTG TAGAAAAAAA TCCGTTTGTA
AAAAAACAGC AAACGGCTGA GATGGTTCAA ATAAATGGAT CTAACATTTT TATTAAAAAG
AAAAATCAAG CAGAACATAA TAGTGTAATG GACATTAGTT TCGTGAAACA AAATAGTAAG
TTTGATTTTT TATTAAATTT AAATAATGAA GTGGTCGATG TTAGGAAAGG GGAAATAGGT
GTACCCATTT ATTATATGCA AAAATATAAT TTGCGTATGG GAGATAAAAT ATGGGTTATT
AAAGATAATA ATGAACTAGA ATTTACGATT TCAGCATTTG TTCGTGATGT TCAAATGAAC
CCATCAATCG TTAGTTCAAA ACGATTTGTA ATAAGCAATA AGGATTTTGA AAGAATAAAA
AGAAATTTTG GAGAAAGCGA ATATCTTATT GAATTCCAGC TAACAGACGA AAATAAAATA
AATGAATTTG AAAATCTATA TAAGTCATCG AACTTACCAC AAAAAGGTCC CTCTATTACG
TATTCACTAT TTAAAACACT CAATTCATTA ACAGATGGAA TAATAGCTGC AGTACTTATC
ATAATAAGTG GATTATTAAT GTTAATTGCA ATGTTATGTA TTAGATTTAC GATCATTACT
TCGATGGAAG AAGATTATCG AGAAATTGGT GTTATGAAAG CAATTGGGAT TCATAACAAA
GATATTCAAA AATTATATAT AACAAAATAT ATTGTGATTT CAGCTGGTGG ATGTATATGT
GGATATATAC TCTCACTATT TGTTACAAAA ATCTTCACTT CAAATATCAC CCTTTATATG
GGGGCGGCAA ATAAAAGCAT TTTACACAAT ATTGTGCCAT TCATAATTAC AATATTGTTA
TTTTTAGTCG TTATCCTGTT CTGTCGTATT ATTTTGCGGA ATTTTAGGGG AATTACAGCA
ATAGACGCTT TACAATCAAG AGATAAACTA GGAAAAAGAA AGATTAGAAA ATCCTTTTCA
CTCAAACAAA CTAAATTTAC AAATGTAAAT ATATTTATTG GTATAGAAGA TGTTATAAAA
AGATTCAAGT TATTTCGTGT ATTAAGTATC GTATTAATAA TAGCTGTGTT CATGATTGTT
GTACCTGTTA ACTTTTTGTA TACGATTCAG TCACCGGATT TTGTAAATTA TATGGGAACA
GGAAAAAGCG ATATTCGAAT AGATTTACAG CAAACTGAAA ATATAGAGAA ACGTTTTAAG
GGTGTTATTT CATATGTAAA AAATGATAAA GAAGTAGAAA AATATGCAAC ATTTGTTACG
AGTACATTTA AAATGGTAAA CGCTGATGGT ACACATGAAA ACTTAAATGT AGAAATGGGA
GACTTCACTA CATTTCCATT AGACTATATC CAAGGTAGGG CACCAAAAAA TGAAAATGAA
ATTGCTCTTT CTTATATGAA CGCAAATGAA TTAAAAAAGA GTGTAGGGGA TTATATCTTT
TTATTTGTAG ATGGGAAAGA GAAAGGACTA GCGATTAGTG GTATATATCA AGATGTAACG
AATGGTGGCA AAACAGCTAA AGCTAGTTTT TCTAATAATA ATGAAAATAT ATTATGGTAT
GTAGTAAATG TAGATATGAA GCCTAAAGTG GACTTGCAAG AAAAAGTGAA GGAGTATAAA
CAAAATTTTA GTTCTGCAAA AATAACAGAT ACAAATGATT ATGTAACGCA AACTTTAGGA
GAAACAATTA AACAATTAAG ACTTGTGACG CAAGTGGCTA TTTTGATTGC GATATTGATA
TCAGTTTTAA TTACTGCGAT GTTTTTTAAA ATGTTATTAG CAAAAGATTC TTCGCAAATT
TTAATTATGA AAAATATCGG TTTTTCTAGT AAAGATATTC GTATACAGTA TATAACACGT
TCTATCGTCA TTGTATTATT AGGCATTTTG ATAGGGACAT GTATAGCTGC TACATTTGGT
GAAATGTTAG TAAGTTGGTT AGGGTCATTT ATGGGAGCAG CTCATATAAA GTTTGTCGTA
AATCCTATCG TTTCTTATAT AATATGTCCA GCTATTTTAT TTATATCTGT GACTGCAACA
ACACTTTTCA GTAGTTTTAC TATGAAGCAA ACAAACGATG TAAAGCCAAA TGGGGAGTAG
|
|---|
| Protein sequence | MIRRMIKRDF SQNKMIITIL FMFIMLSSLL MASASSNVIT LLNSMDQLVK VSNAPHFVQM
HAGEVNQKSI DSFVEKNPFV KKQQTAEMVQ INGSNIFIKK KNQAEHNSVM DISFVKQNSK
FDFLLNLNNE VVDVRKGEIG VPIYYMQKYN LRMGDKIWVI KDNNELEFTI SAFVRDVQMN
PSIVSSKRFV ISNKDFERIK RNFGESEYLI EFQLTDENKI NEFENLYKSS NLPQKGPSIT
YSLFKTLNSL TDGIIAAVLI IISGLLMLIA MLCIRFTIIT SMEEDYREIG VMKAIGIHNK
DIQKLYITKY IVISAGGCIC GYILSLFVTK IFTSNITLYM GAANKSILHN IVPFIITILL
FLVVILFCRI ILRNFRGITA IDALQSRDKL GKRKIRKSFS LKQTKFTNVN IFIGIEDVIK
RFKLFRVLSI VLIIAVFMIV VPVNFLYTIQ SPDFVNYMGT GKSDIRIDLQ QTENIEKRFK
GVISYVKNDK EVEKYATFVT STFKMVNADG THENLNVEMG DFTTFPLDYI QGRAPKNENE
IALSYMNANE LKKSVGDYIF LFVDGKEKGL AISGIYQDVT NGGKTAKASF SNNNENILWY
VVNVDMKPKV DLQEKVKEYK QNFSSAKITD TNDYVTQTLG ETIKQLRLVT QVAILIAILI
SVLITAMFFK MLLAKDSSQI LIMKNIGFSS KDIRIQYITR SIVIVLLGIL IGTCIAATFG
EMLVSWLGSF MGAAHIKFVV NPIVSYIICP AILFISVTAT TLFSSFTMKQ TNDVKPNGE
|
|---|
| |