| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2130 |
|---|
| Symbol | mmsA |
|---|
| ID | 2856508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 2208405 |
|---|
| End bp | 2209865 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637513555 |
|---|
| Product | methylmalonic acid semialdehyde dehydrogenase |
|---|
| Protein accession | YP_036457 |
|---|
| Protein GI | 49477631 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.000408712 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAA CTGAAATTAA ACGAGTAAAA AATCATATTA ATGGTGAGTG GGTAGAATCT
ACTGGTACAG AAGTAGAAGC AGTTCCAAAT CCGGCGACTG GAAAAATTAT CGCTTACGTT
CCGCTATCTC CGAAAGAAGA TGTTGAAAAA GCTGTTGAAG CAGCAAAAGC AGCATATGAA
ACATGGTCTA AAGTACCAGT TCCGAATCGT TCAAGACAAT TGTATAAATA TTTACAGCTT
TTACAAGAAA ACAAAGAAGA ACTGGCAAAA ATTATTACGC TAGAAAATGG TAAAACATTA
ACGGATGCAA CTGGTGAAGT ACAGCGTGGT ATTGAAGCAG TAGAACTTGC AACGTCAGCA
CCAAATTTAA TGATGGGACA AGCACTTCCG AATATTGCTA GTGGCATTGA TGGATCAATT
TGGCGCTATC CAATCGGGGT TGTTGCTGGT ATTACACCTT TTAACTTCCC AATGATGATT
CCATTATGGA TGTTCCCTCT TGCAATTGCT TGTGGTAATA CATTCGTATT AAAAACATCT
GAAAGAACGC CGCTTTTGGC TGAAAGACTT GTGGAGTTAT TCTATGAAGC TGGTTTTCCA
AAAGGCGTAC TAAATTTAGT ACAAGGCGGA AAAGATGTTG TAAATAGCAT TTTAGAAAAT
AAAGATATTC AAGCTGTTTC GTTCGTTGGA TCTGAGCCGG TAGCTCGTTA CGTATACGAA
ACAGGTACGA AACATGGAAA ACGTGTACAA GCGTTAGCTG GTGCGAAAAA CCACGCGATT
GTAATGCCAG ATTGCAATCT TGAGAAAACA GTGCAAGGTG TAATTGGATC CGCATTTGCA
AGTAGCGGAG AACGCTGCAT GGCATGTTCA GTAGTAGCGG TAGTTGATGA AATTGCTGAT
GAATTCATTG ACGTACTAGT AGCAGAGACG AAGAAGTTAA AAGTAGGTGA CGGTTTCCAC
GAAGATAATT ATGTTGGACC ATTAATTCGT GAATCTCATA AAGAGCGTGT ATTAGGCTAT
ATTAATAGCG GTGTAGCAGA TGGAGCAACG TTATTAGTAG ATGGCCGCAA AATTAAGGAA
GAAGTTGGAG AAGGTTACTT TGTAGGTGCG ACAATCTTTG ATGGCGTAAA TCAAGAAATG
AAAATTTGGC AAGATGAAAT TTTCGCTCCA GTATTAAGCA TTGTCCGTGT TAAAGATTTA
GAAGAAGGTA TTAAACTAAC AAATCAATCT AAATTTGCAA ATGGTGCGGT TATTTATACG
TCAAACGGTA AACATGCACA AACGTTCCGT GATAACATCG ATGCGGGTAT GATCGGTGTA
AACGTAAACG TTCCAGCACC AATGGCATTC TTCGCATTTG CAGGAAATAA AGCGTCATTC
TTTGGTGATT TAGGTACAAA TGGTACAGAT GGCGTTCAAT TTTATACACG TAAAAAAGTT
GTAACTGAGC GCTGGTTTTA A
|
|---|
| Protein sequence | MITTEIKRVK NHINGEWVES TGTEVEAVPN PATGKIIAYV PLSPKEDVEK AVEAAKAAYE
TWSKVPVPNR SRQLYKYLQL LQENKEELAK IITLENGKTL TDATGEVQRG IEAVELATSA
PNLMMGQALP NIASGIDGSI WRYPIGVVAG ITPFNFPMMI PLWMFPLAIA CGNTFVLKTS
ERTPLLAERL VELFYEAGFP KGVLNLVQGG KDVVNSILEN KDIQAVSFVG SEPVARYVYE
TGTKHGKRVQ ALAGAKNHAI VMPDCNLEKT VQGVIGSAFA SSGERCMACS VVAVVDEIAD
EFIDVLVAET KKLKVGDGFH EDNYVGPLIR ESHKERVLGY INSGVADGAT LLVDGRKIKE
EVGEGYFVGA TIFDGVNQEM KIWQDEIFAP VLSIVRVKDL EEGIKLTNQS KFANGAVIYT
SNGKHAQTFR DNIDAGMIGV NVNVPAPMAF FAFAGNKASF FGDLGTNGTD GVQFYTRKKV
VTERWF
|
|---|
| |