Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_2073 |
Symbol | gabD |
ID | 2856670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 2155889 |
End bp | 2157313 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637513498 |
Product | succinic-semialdehyde dehydrogenase NAD(P)+ |
Protein accession | YP_036400 |
Protein GI | 49477595 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.578512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC ATTTATATAT AAATGGAGAT TGGAAGTCTG TAAACACGTA TAAACCATTA TACGCACCAT ATTCTGAAGA AACATTAGCG GAAATTGCGC AAGGAACGGA AGAAGATGTA AAAGAGGCTG TTGCTGCTGC AAAAAATGCC ATGAAAGAAA TGAATACATT ATCTGCATAT GATCGTGCGA CTATTTTAGA GAAAGTCGCA CAAAAAATGG ATGAAAGAAG AGAAGAATTT GCAGAGATTA TTGCAAAAGA GGCTGCAAAA CCAATACGTG CTGCAAGGGG AGAAGTAGAT CGTACCGTTC AAACATATAA ATTTGCAGCT GAAGAAGCGA AGCGTATATA CGGTGAGACA CTGCCACTTG ATGCAGCACC TGGTGCAGAT GGGCGTATTG CATACACAAT ACGAAAACCG ATTGGGGTTA TAGGGGCTAT TACACCATTT AATTTTCCAT TAAATTTAGT GGCACATAAA GTTGGTCCTG CAATTGCTGC TGGAAATACA GTTGTATTAA AACCAGCTGA TCAAACGCCT CTATCATCTT ACGCATTAAT CGAACTATTT GAAGAGGCAG GATTGCCAAA AGGAGCTTTA AATATTATTT CTGGCCCCGG TTCAACTGTT GGTGAAGCAA TAGTTACAAA TGATGATGTG GCTTCCATTA CTTTTACAGG AAGTCCGAAA GTTGGAATTG GAATTAAGGC AAAGGCTGGG TTAAAGCGAG TTACGTTAGA ACTAGGATCA AATGCTGCAG TTATTATTGA TGAAGATGTA GAATTAACAG ATGAATTAAT TGAACGTGTA AAATGGGGAG CATTTGTTAA TAATGGACAA GTTTGTATTT CGGTGCAACG TGTTTTTGTA CATGAAGAGA GAATGGATGA CTTTCTATCA AAGTTACGGA AAGCGATGGA AACAGTTGTT GTTGGTGATC CGCTGATTGA GGAAACGGAT GTATCAGCTT TAATTTCGAA AAAAGATGTC GAGCGTATCG ATAACTGGGT GCAAGAAGCG GTTAAAGAAG GAGCAAACGT TTTATATGGC GGTAACAAAC GTGATGAAAG GGTTTTTGAA CCAACTGTAT TAACAAATGT GCCGGAGCAT GTATCTGTAC AGTGCCAAGA AGTATTCGGC CCACTTATGA CAGTAAATAC ATTTAAAGAA TTTGATGAGG CCATAGAGCA AGTAAATAAT TCACGTTACG GTCTACAAGC AGGCGTATTT ACTAATAATT TGTTTAAAGC AATGCGTGCA ATTGATGAAT TAGAAGTTGG TGGTGTCATG ATAAATGATA TTCCGACGTT TAGAGTAGAT CATATGCCTT ACGGTGGTGT GAAAGAAAGC GGTACAGGGC GTGAAGGAAT TAAATATGCA ATAGAAGAAA TGACAGAAAT GAAATTAGTA TGTATTAAAA AATAA
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Protein sequence | MKKHLYINGD WKSVNTYKPL YAPYSEETLA EIAQGTEEDV KEAVAAAKNA MKEMNTLSAY DRATILEKVA QKMDERREEF AEIIAKEAAK PIRAARGEVD RTVQTYKFAA EEAKRIYGET LPLDAAPGAD GRIAYTIRKP IGVIGAITPF NFPLNLVAHK VGPAIAAGNT VVLKPADQTP LSSYALIELF EEAGLPKGAL NIISGPGSTV GEAIVTNDDV ASITFTGSPK VGIGIKAKAG LKRVTLELGS NAAVIIDEDV ELTDELIERV KWGAFVNNGQ VCISVQRVFV HEERMDDFLS KLRKAMETVV VGDPLIEETD VSALISKKDV ERIDNWVQEA VKEGANVLYG GNKRDERVFE PTVLTNVPEH VSVQCQEVFG PLMTVNTFKE FDEAIEQVNN SRYGLQAGVF TNNLFKAMRA IDELEVGGVM INDIPTFRVD HMPYGGVKES GTGREGIKYA IEEMTEMKLV CIKK
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