| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2051 |
|---|
| Symbol | oppC |
|---|
| ID | 2856975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 2133006 |
|---|
| End bp | 2134055 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637513478 |
|---|
| Product | oligopeptide transport system, permease |
|---|
| Protein accession | YP_036380 |
|---|
| Protein GI | 49479210 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0000479974 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAAG CAATTGAAAG GAGCAGCTTT ATGAAATCTA TTTGGAAATC AAAACGCTTT
TTAATCGGCT TTACTTATTT ATTCATACTT GTTTCAGCTA GTTTTATTTA TAGTTGGTTC
TTTAAAGATA CCATCCCAAA AGCTCCCCAG TTACTTTACA ATGACAATAA CGAATTACTT
GGAAAGGCTC CCTTTCCACC ATCATTAATA CCGCCTTTTG GATCGGATCG TTTTGGAGAG
TCTGTTTTCT TACAAATTAT AGAAGGAGCA AAGTTCACCA TTTTATTAGC CGTAGTAATT
AGCTTCTTTC GCATATTATT CGGAACATGT ATAGGAATAC TCTTAAGTTT ATACGCTTCA
AAATTCAAGA GATTTTTCCA GGCATGCTCA GAAGTTTTTT ACTATATTCC TACTTTATTT
ATCGCATTTA TACTCATCAC ACCTGTTAAT ATTGTAATCG TATCAAATGC TGATAGATTA
GATCCAAATA TTTCATTTGC GTTTTATCAA GTACTCGTAC TTATTTTCGT CGCACTGCCT
ACACTTTCTT TATATATATC CTCAGAGGTT GATGAATTTA TGAAACAAGA TTACATTTTA
AGTTCCCAAT TGCTAGGAGC TAGCCGTTTT CATATTATCA AAAAACACTT ACGAGTCTTG
TTACTTGATC GCTTATTTGT GTTATTTATG GAACATATTG TCCAAGCGCT CATACTCGTT
ATCCATTTAG CGTTGCTTGA TATTATAATT GGCGGGATCC AAATGCGGGA ACTCTATGAT
GGAGCGCTCA AACCTGTTTC TCTATCTAAT GATTGGGCTG GCCTTGTTGG ATTAAATCGT
TATGAAATGA ATCTTTCGTG GTGGATTATT TTTTATACTC TCGCTTCATT CTTTATTACA
ATTCTATTTA TTAAGCTTAT GACAATCGGG ATTCAAGATG CACTGAAAGC AAGAGATTCG
CAAACTGTAG CAATTCAATC TGTTCCAGAT CAAAAGAAAT TTGTTAAACA TAAAGATTCT
TTTTCTTTTG CAAATAAAGT AAACCTTTAA
|
|---|
| Protein sequence | MAKAIERSSF MKSIWKSKRF LIGFTYLFIL VSASFIYSWF FKDTIPKAPQ LLYNDNNELL
GKAPFPPSLI PPFGSDRFGE SVFLQIIEGA KFTILLAVVI SFFRILFGTC IGILLSLYAS
KFKRFFQACS EVFYYIPTLF IAFILITPVN IVIVSNADRL DPNISFAFYQ VLVLIFVALP
TLSLYISSEV DEFMKQDYIL SSQLLGASRF HIIKKHLRVL LLDRLFVLFM EHIVQALILV
IHLALLDIII GGIQMRELYD GALKPVSLSN DWAGLVGLNR YEMNLSWWII FYTLASFFIT
ILFIKLMTIG IQDALKARDS QTVAIQSVPD QKKFVKHKDS FSFANKVNL
|
|---|
| |