| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2029 |
|---|
| Symbol | tatC |
|---|
| ID | 2853755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 2113978 |
|---|
| End bp | 2114721 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637513456 |
|---|
| Product | sec-independent protein translocase |
|---|
| Protein accession | YP_036358 |
|---|
| Protein GI | 49477570 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00000000711776 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATC GGGAAATGAG CGTCGTAGAA CATATAGTTG AGCTTCGCAA AAGAGTAATA
TATACAGTGC TATCCTTTGT ACTATTTTTA ATTATTGGGT TTACTTTTAC GAAGGATATT
TATTTTTGGC TTGTCAAAGA TTTACCAATG AAATTAACTG TTCTCGGTCC AAGTGATGTA
TTGTGGATTT TTTTCTCGAT TGCTACAGTA TTTGCTATCG TTTGTACAAT TCCTTTTGCT
GCTATACAAA TTTGGCTATT CGTAAAACCG GGTTTACATC CAAATGAACA AAAGATGACA
GTCATGTATA TACCGGTATT GTCTATATTA TTTATTGCAG GTTTATGCTT TGGATATTTC
GTTGTAATGC CGTTTTTATT TCATTTTTTA ACTACGATAG GTAATGAAAT GTTTAATACG
ATGTTTACGA CAGAAAAGTA TTTTCATTTT GTTCTTAATT TAACAGTTCC ATTTGCTGTA
ATTTTTGAAT TGCCAGTAGT AGTAATGTTT TTAACGAGTA TTGGACTATT GACGGCAGAA
TTTCTAATAA AAATAAGAAG GTATGCTTAC GTAGCATTGA TTATCATTGC ATCGTGTATA
TCACCGCCAG ATTTTTTATC TCATAGTTTA GTGGCAGTAC CGCTTATTTG TATTTATGAA
ATTAGTATTG CTTTATCAAA GATTGTTAGT AAGCGAAAAA AGAAAAGAGA AGATGAAAGC
CAGTCGAAAA GTGCCGCGTT ATAA
|
|---|
| Protein sequence | MEDREMSVVE HIVELRKRVI YTVLSFVLFL IIGFTFTKDI YFWLVKDLPM KLTVLGPSDV
LWIFFSIATV FAIVCTIPFA AIQIWLFVKP GLHPNEQKMT VMYIPVLSIL FIAGLCFGYF
VVMPFLFHFL TTIGNEMFNT MFTTEKYFHF VLNLTVPFAV IFELPVVVMF LTSIGLLTAE
FLIKIRRYAY VALIIIASCI SPPDFLSHSL VAVPLICIYE ISIALSKIVS KRKKKREDES
QSKSAAL
|
|---|
| |