| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_1783 |
|---|
| Symbol | mccF |
|---|
| ID | 2855257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 1871424 |
|---|
| End bp | 1872425 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637513213 |
|---|
| Product | microcin immunity protein |
|---|
| Protein accession | YP_036115 |
|---|
| Protein GI | 49481175 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.0982524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACTTC CAAAATCTTT AAAATGCGGA GACACAATTG GGATTTACTC ACCTTCTTCA
CCAGTAACCT ACACTTCTCC CAAAAGATTC GAACGTGCAA AATCTTACTT ACTTCAAAAA
GGATTTCATA TATTCGAAGG TTCGCTAACA GGGCGATATG ACTATTATCG TTCTGGCAGT
ATACAAGAGC GTGCTGAGGA ACTGAATGCT TTAATAAGAA ACCCTAATGT ATCTTGTATC
ATGTCAACAA TTGGCGGTAT GAATTCTAAT TCCCTATTAC CTTATATTGA TTATAACGCT
TTTCAAAATA ACCCTAAAAT AATGATTGGC TATTCAGATG CAACAGCTTT ATTACTAGGG
ATTTATGGAA AAACAGGAAT TCCTACATTT TACGGTCCGG CACTCGTTCC CTCTTTTGGA
GAGTTTGAGC CTTTTGTAGA TGATACGTAC AAATATTTTG CAGAAACATT ACTGCATGAC
CAAGCACTTC CTTACAACAT AAAACAACCT TTATTTTGGT CAGACGAATT TATTAATTGG
GAAGAGAAAA CGAAAGATAA AGAACTTAGA CCAAATAATT GGATTTCTGT AACAAATGGA
CAAGCTACTG GACGTGTTAT TGGTGGCAAC TTAAATACAA TACAAGGGAT TTGGAGCAGC
CCTTATATGC CATGTATTCA AGAAGGCGAT ATTCTATTTA TTGAAGATAG CTCAAAAGAT
GCAGCTACCA TTGAAAGAAG CTTTTCATTC CTAAAAATTA ACGGTGTATT TGACAAAGTT
TCAGGCATTA TTCTTGGAAA ACATGAGCAA TTTGATGATT GTGGTACAAA TCGCAAACCA
TACGAAATAC TTTTAGAAGT ACTCCAAAAT CAAAGAATCC CTTTACTAGC TGAATTTGAT
TGTTGTCATA CCCATCCAAT GATCACTATG CCGATAGGTA TTCAAGTGAA CATGGATGCA
ACCAATAAAA CAATACATAT TTTAGAGAAA TGGAAGATAT AA
|
|---|
| Protein sequence | MILPKSLKCG DTIGIYSPSS PVTYTSPKRF ERAKSYLLQK GFHIFEGSLT GRYDYYRSGS
IQERAEELNA LIRNPNVSCI MSTIGGMNSN SLLPYIDYNA FQNNPKIMIG YSDATALLLG
IYGKTGIPTF YGPALVPSFG EFEPFVDDTY KYFAETLLHD QALPYNIKQP LFWSDEFINW
EEKTKDKELR PNNWISVTNG QATGRVIGGN LNTIQGIWSS PYMPCIQEGD ILFIEDSSKD
AATIERSFSF LKINGVFDKV SGIILGKHEQ FDDCGTNRKP YEILLEVLQN QRIPLLAEFD
CCHTHPMITM PIGIQVNMDA TNKTIHILEK WKI
|
|---|
| |