Gene BT9727_1780 details

Gene Information

• Locus tag: BT9727_1780
• Symbol: cydC
• ID: 2856846
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus thuringiensis serovar konkukian str. 97-27
• Kingdom: Bacteria
• Replicon accession: NC_005957
• Strand: +
• Start bp: 1868563
• End bp: 1870287
• Gene Length: 1725 bp
• Protein Length: 574 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637513210
• Product: transport ATP-binding protein
• Protein accession: YP_036112
• Protein GI: 49479637
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
• TIGRFAM ID: [TIGR02868] thiol reductant ABC exporter, CydC subunit

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAACT GGATTAAACC GTATGTACAG CAAAATAAAG GTAGAATGAC TGTAACTATT 
TTCCTTGGTC TGCTTGGAGT TAGTTCAGGT GCAATGCTAC TTTTCATTTC AGGTTATTTA 
ATCTCTAAAT CTGCTCTTAG ACCAGAAAAT ATAATGGCAG TTTATGTACC TATCGTTGCA 
ACACGTGCGT TTAGTATAGG ACAAGCGGTA TTTCATTATT TAGAGCGTTT AGTTGGACAC 
GATGTTGTAT TACGCATATT AGAAAAGATG AGAACGAAAC TATATGGGAT AGTAGAACCA 
CAGGCGTTAT TTTTCCGTTC GCGATTCCAA ACGGGTGATA TGTTAGGGGT ATTATCCGAA 
GATATAGAGC ATTTACAAAA CCTATATTTA CGTACAATAT TTCCTAGCAT ATTAGCATTA 
GTTGTATATA GCATATTCGT ACTTGTTATT GGTTCATTTG ACGTAATGTT TGCACTTATT 
GCAGGGTGTA TGCTAGCGAT TATCGTTTTT CTTCTCCCAT TTATATCATT ACTTTTGATG 
AAGAAACATC ATGTTACTTT AAAGCAAGGA AGAAACCGTT TGTACCAACA ACTAACAGAT 
GCTGTTTTTG GATTATCTGA TTGGCAAGCA AGTGGTAGAA AAGATGAATT CATTGATAAG 
TATGTAGAAC AAAATGATCA GTTGTTAAAA ATCGAGAAAA GAATGAAGCG CTGGAATCAT 
ATTCGGGACA GTATCATTCA ATTAGTAGTA GGGGTTGTAG TCATTTCAAT GATCGTATGG 
ACTGGAAATG AGGCGGCAAG TGAACTGATT GCACCTACTG TTATTGCGGC TTTCGTCTTA 
ACGACGTTAT CTGTCACAAA CGCGCTTATT CCTCTTTCAG ATGCCATCGA TCGCATTCCA 
TCGTATGTAG AATCTGCTCA TCGTCTAAAT CAAGTAGAAG GTAAAGATAC TTTACAGTAT 
GAAGAGGACT TATATGGAGA TAAAGAGTAT GTTGCATCAA AACATATAGA CATTGAATTA 
AATCATGTAT CGTATAGTTA TCCAGATAGC AATGAATTTG TATTGAAAGA CGTATCATTA 
CAAATAAAAG CAGGGAAGAA AATCGCCATT TTAGGAAGAA GCGGAACAGG AAAATCAACT 
TTATTAAAAC TGTTAACAGG TGCGCTAAGC CCATTACATG GTAAAGTTTT ATTGAATAGT 
GAACATGCTC ACACGAATCT TTTATCAAAA TATATTTCTG TATTGAATCA AAAGCCGCAT 
TTATTCGATA CGACAATTGG AAATAATGTA AGGATAGGCA AATCAGAGGC AACAGATGAA 
GAGATATGGA AAGCTTTAGA GAAAGCACAA TTAGCTTCGC ATATTGCTTC TCTTCCAGAT 
GGATTACAAA CGAAAATGCA TGAGATGGGA AAAAGATTTT CTGGCGGGGA AAGACAACGA 
GTTGCATTTG CAAGAACGCT AATGCAAGAA GCACCAATCA TTGTACTAGA TGAACCTACA 
ATCGGCTTAG ACCCAAAGAC AGAATTATCT TTAATAGAAA CAATGTTTTC TGCAACGGAA 
GAAAAGACAG TAATTTGGAT TACGCACCAT CTTGTAGGCA TTGAGCATGT TGATGAAGTA 
ATATTCCTTG ATCGTGGTCA AATTGTGATG CAAGGTAGTC ATGAACAACT TCTGAAAGAA 
AATGAGAAGT ATAGACAGCT TTATGAACTT GATAAAGGAA TATAG 

 

Protein sequence

MSNWIKPYVQ QNKGRMTVTI FLGLLGVSSG AMLLFISGYL ISKSALRPEN IMAVYVPIVA 
TRAFSIGQAV FHYLERLVGH DVVLRILEKM RTKLYGIVEP QALFFRSRFQ TGDMLGVLSE 
DIEHLQNLYL RTIFPSILAL VVYSIFVLVI GSFDVMFALI AGCMLAIIVF LLPFISLLLM 
KKHHVTLKQG RNRLYQQLTD AVFGLSDWQA SGRKDEFIDK YVEQNDQLLK IEKRMKRWNH 
IRDSIIQLVV GVVVISMIVW TGNEAASELI APTVIAAFVL TTLSVTNALI PLSDAIDRIP 
SYVESAHRLN QVEGKDTLQY EEDLYGDKEY VASKHIDIEL NHVSYSYPDS NEFVLKDVSL 
QIKAGKKIAI LGRSGTGKST LLKLLTGALS PLHGKVLLNS EHAHTNLLSK YISVLNQKPH 
LFDTTIGNNV RIGKSEATDE EIWKALEKAQ LASHIASLPD GLQTKMHEMG KRFSGGERQR 
VAFARTLMQE APIIVLDEPT IGLDPKTELS LIETMFSATE EKTVIWITHH LVGIEHVDEV 
IFLDRGQIVM QGSHEQLLKE NEKYRQLYEL DKGI