| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_1779 |
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| Symbol | cydD |
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| ID | 2855270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | + |
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| Start bp | 1866845 |
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| End bp | 1868560 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637513209 |
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| Product | ABC transporter, ATP-binding and permease |
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| Protein accession | YP_036111 |
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| Protein GI | 49481173 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA AAAGAGGACT TCCGTCGTAT CCTGGTAGCC GAGTTTTATA TGTAGTGCTA
ACAATCATTA GCATTTTAGA AGCTTTTAGT ATTATTGCAC AAACAGTGTT TTTAGCGCGG
GCTATTACGT TTTTATTTCA GGGAGAAGCA GTGCAATCTG TGTTAAATGA AACTGTTTAT
TTCGGAATCA CGTTTGTAGT ACGTCACTTG CTAGTTCGAA TATCGCAAAT ATTAGTGGAA
CGTTTTGCTG AAAAAACAGG ATCGCTACTG AGAAAACAAT TAATAGAGGC ATATTTCACA
TTAGGTCCAC GGTATGTTCA AACTACTGGA ACAGGTCATC TGGTTACCTT ATCGATAGAG
GGTATTGAGA AATTTAAAAC ATATATTGAA TTAACTATTC CTAAAATGAT TAGAAGTAGT
ATCGTACCGG GACTAATTGT ACTATATGTT TTTACACTAG ATATGGAGTC TGGAATCATT
TTGGTTGTAA CGATTCCTAT CGTAATTGTT TTTATGATCC TACTAGGATT AGCAGCCCAG
AAAATGGCGG ATAGCCAATA TGAAACATAT CGTGTTCTTT CTAATCATTT TGTAGATACG
TTAAAAGGAT TAGAAACATT AAAGTATTTA GGTCAAAGTA AACAACACGA AGGAAAGATT
GAAAAAGTAA GTAAAAGATA TAGAAAAGCA ACGATGCGTA CTTTGCGGGT TGCTTTTCTT
TCTTCATTTG CATTAGATTT CTTTACGAGT TTATCAATTG CATTTGTAGC GGTCGGATTA
GGGATACGTT TAATAGATGG GACAATTGTA CTATTACCAG CCCTTACGAT TTTAATTTTA
GCTCCGGAAT ATTTCTTACC GATTAAACAA GTTGGAGCAA ATTATCATGC TACATTAGAT
GGACAACTTG CAATGGAGCA AATAGAAGAG ATTTTACAGC GACAAAAAGA AATAGGGAAG
AAAGAATCTA ATGTAGATCT AATATGGAAT TCCTCTAGTA ACTTGAAATT ACAAGATGTA
AAAGTAAAGA ATGATGAATC TGAAAAAGCT ATATTAGAGG GAATTGATTT TACTTGGAAT
GGAAACGGCG CTATAGGTGT AATTGGTGAA AGTGGGGCAG GGAAATCGAC GTTAATCGAC
GTATTAGCTG GATTTTTAAC TCCTTCGGGT GGAAAGATGA TTGTAAATGG TGTGGAAATT
GACGGGTCTA CTCGTGAAGA GTGGCAAAAG AATATTGCTT ATATTCCGCA GCAACCTTAT
ATTTTCCCGC TTTCATTAAA AGATAACATT TGTTTCTATG AAACAAATAC AACTGATGAA
GAAGTGGAAA GAGTTATTAA TGAAGTCGGT CTTCGTTCAC TTGTTACATC GCTTCCGAAT
GGAATGTATG AAAGAATTGG AGAAGGTGGG CGTATGCTTA GTGGCGGACA AGAACAACGT
GTCGCAATGG CGCGAGCCCT TTTAAGTAAA AAGCCAATTA TTTTATTAGA CGAGCCTACG
GCACATCTTG ATATTGAAAC TGAATTTGAA ATAAAGCAAG CGATGTTACG TCTGTTTGAA
GGTAAGTTAG TATTTCTTGC AACACATCGT CTTCACTGGA TGAAACAAAT GGATCATATT
CTTATTTTAA ATAAAGGGGA AATGATAGAA AGTGGAACCT ATGAAGAACT TGTAAAGAAT
GAGACATTAC ATGTTCACAG GAAAGAGAGG GTATAG
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| Protein sequence | MKRKRGLPSY PGSRVLYVVL TIISILEAFS IIAQTVFLAR AITFLFQGEA VQSVLNETVY
FGITFVVRHL LVRISQILVE RFAEKTGSLL RKQLIEAYFT LGPRYVQTTG TGHLVTLSIE
GIEKFKTYIE LTIPKMIRSS IVPGLIVLYV FTLDMESGII LVVTIPIVIV FMILLGLAAQ
KMADSQYETY RVLSNHFVDT LKGLETLKYL GQSKQHEGKI EKVSKRYRKA TMRTLRVAFL
SSFALDFFTS LSIAFVAVGL GIRLIDGTIV LLPALTILIL APEYFLPIKQ VGANYHATLD
GQLAMEQIEE ILQRQKEIGK KESNVDLIWN SSSNLKLQDV KVKNDESEKA ILEGIDFTWN
GNGAIGVIGE SGAGKSTLID VLAGFLTPSG GKMIVNGVEI DGSTREEWQK NIAYIPQQPY
IFPLSLKDNI CFYETNTTDE EVERVINEVG LRSLVTSLPN GMYERIGEGG RMLSGGQEQR
VAMARALLSK KPIILLDEPT AHLDIETEFE IKQAMLRLFE GKLVFLATHR LHWMKQMDHI
LILNKGEMIE SGTYEELVKN ETLHVHRKER V
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