Gene BT9727_1636 details

Gene Information

• Locus tag: BT9727_1636
• Symbol: sigW
• ID: 2854104
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus thuringiensis serovar konkukian str. 97-27
• Kingdom: Bacteria
• Replicon accession: NC_005957
• Strand: -
• Start bp: 1709915
• End bp: 1710397
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637513066
• Product: RNA polymerase sigma factor SigW
• Protein accession: YP_035968
• Protein GI: 49481088
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.000000576996
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAAACAT ATCGTCATTA TATTTTTCAA GTTATCTTTT CTATTTTAAG ACATGAAGAA 
GATGCGAAAG ATGTTACACA AGAAGTATTC GTAAAAATTC ACGCCTCTCT CCCTAATTAT 
CAATTTCGCG GATTAAAAAC GTGGATGGCG CGTATTGCCA CCAATCACGC TATTGATTAT 
AAGAGAAAGA AAGCTAGAGA AAATGAAGAA CTCTCCTTAT GTAAAGAAAC TGAAGAAAAT 
ATAAAATCCT CTCATAATAT TGAGGATTTA TTATTGACGA AAGAGCAAAA ATTACTCATC 
GCTCAAAAAC TGAGAGAACT TCCCGAAAAT TACCGTGACG TCGTTCTCGC ACATTACTTA 
GAAGAAAAAA GTTATCAAGA AATTGCTTTG CAGGAAAAAA TCGAAGTAAA AACAGTCGAA 
ATGAAACTGT ATCGGGCAAG AAAATGGATT AAAAAACATT GGAAGGAGGA AGAGTTTCTA 
TGA 

 

Protein sequence

MQTYRHYIFQ VIFSILRHEE DAKDVTQEVF VKIHASLPNY QFRGLKTWMA RIATNHAIDY 
KRKKARENEE LSLCKETEEN IKSSHNIEDL LLTKEQKLLI AQKLRELPEN YRDVVLAHYL 
EEKSYQEIAL QEKIEVKTVE MKLYRARKWI KKHWKEEEFL