Gene BT9727_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_1588 
Symbol 
ID2855662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand+ 
Start bp1661633 
End bp1662739 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content35% 
IMG OID637513018 
ProductECF-type sigma factor negative effector 
Protein accessionYP_035920 
Protein GI49477337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000000000000623788 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACA TTTATGAACT ATTAAATGAT ATTGATATAG ATGAGAAAGA ACTTGAGGAA 
ATTGAGGCTT CTGAAATTGA AAAAGAAAAA GTGAAGCGTA ATGTAAAACA ATCTATTTGT 
ACGAAGAAAA AGATGAAAAG TTGGAAAAAA GGCGTTGCTG CTGCATCTAT TTTAGTCGGC 
GTATCGGTTG CCATGCTTGG CATCGGATTT CCGACATACG CTGGAGGATT ACCAATAGTA 
GGTGACATAT TCCGATTTTT AGATAATGGT AGAACAGGGT TATATGAAAA TTATAAAGAG 
TTTTCGACTG AATTGAATAT GACGCGGGAG AGTAATGGAG TTAAGGTTAC AATTAATGAT 
GCTGTGTTCG ATGGTAGAAC TATTACAATC ACATATTCTA TTGAGAGCGA AAAAGATTTA 
GGAGAGAAAC CGTTCCCATT TGGAAGTCCG CAAGTTATGG GCTTTGATGG CGGAGGGGGT 
AGTTCGAACG TTACAAAAGT TGGAGAGGGG AAATACGTAG GTATGACTAC GATGAGTGGT 
AATAGTAGTA AAAGGTTAGA TGTTGCAAAC GTTTGGTGGA ATATGGAAGA GATTGAGTTG 
GATTATAAAG GTAATTCAAT TAAGGGGAAT TGGAACTTCG CACTTAGCTT AAAAGCAATG 
GAGAGTAAAG AAGTAAAGGT TAATGGGGTT TCTGAAAATG AATTAATAAA AGTAAATATA 
GACAAAATGG AAGTAACTCC GATGTCATTT ATCGTTTTCT TCAATCAGGA AGAATCTAAA 
GTATTAAGAA GTATATGGGA TAGCGCTGAT GTAGAATTAG AAATAAAAGA TGATTTAGGA 
AATAAATATG CTGGTGAAGG AAATGGCGGA ACTAGTACAG TAGCAGAGCC ACATAAAAGT 
AGTTGGAGTG CTACATTCCA AAAATTGAAC AAAAACGCTA CGAAGCTTAT CGTTACACCT 
CAAGTGAACT TACGAGTACA TACATCAGAA AACTTTGGTG GAGTGGAATT TATTAATGGT 
ATCGAGAAAA AAATTGAAGT GCCGAATAAA GAAGCGAAAA AGAAAGATAT TGTTTTAGAT 
GATATTGTAA TTGATTTAAA GAAATAA
 
Protein sequence
MKDIYELLND IDIDEKELEE IEASEIEKEK VKRNVKQSIC TKKKMKSWKK GVAAASILVG 
VSVAMLGIGF PTYAGGLPIV GDIFRFLDNG RTGLYENYKE FSTELNMTRE SNGVKVTIND 
AVFDGRTITI TYSIESEKDL GEKPFPFGSP QVMGFDGGGG SSNVTKVGEG KYVGMTTMSG 
NSSKRLDVAN VWWNMEEIEL DYKGNSIKGN WNFALSLKAM ESKEVKVNGV SENELIKVNI 
DKMEVTPMSF IVFFNQEESK VLRSIWDSAD VELEIKDDLG NKYAGEGNGG TSTVAEPHKS 
SWSATFQKLN KNATKLIVTP QVNLRVHTSE NFGGVEFING IEKKIEVPNK EAKKKDIVLD 
DIVIDLKK