| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_1254 |
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| Symbol | ldcA |
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| ID | 2856287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | - |
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| Start bp | 1338506 |
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| End bp | 1339426 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637512687 |
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| Product | muramoyltetrapeptide carboxypeptidase; microcin immunity protein |
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| Protein accession | YP_035589 |
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| Protein GI | 49477202 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.203057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATATATC CAAATACATT ACAACAAGGT GATACAGTAA TGATTATTGC ACCGTCCGGC
CCACCAACAA TTGAAAATGT ATTAAAAGGT GTAAAGGTAT TACAAGAAAT GGGTTTATCT
GTAGTAATCG GGAAGAGTGT TTATGAGAAA TATGGATATT TAGCTGGAAG GGATCAAGTC
CGGCTTGATG ATATACATGA AGCATTTTCA AATCATGAAG TAAAGGCCGT TTTCTGTGCA
CGAGGTGGTT ACGGTAGCGC TCGTCTCCTC CCTCACATTC AATATGAAAT CATTCGTCAA
AATCCAAAAA TCTTTTGGGG ATATAGCGAT ATTACAGCTT TACATACTGC CTTTTCACGT
TATGCAAAGC TTATTACTTT TCATGGCCCA ATGGTTGAAG AATTAGGGAA AGGTATAGAT
TCTCTTTCTT TATCTTCTTT CAACCAACTA TTTCATCCGT ATTCAACCAT TTTATCTGCG
TCAGAATGTA TCGTACCTAG CTCTTCCCGT ACAATTACAG GTCAATTAGT TGGAGGGAAT
TTAGCAGTGC TAACGAGCAT AATTGGCTCA CACTACGAGG TACATACAGC CAATAAACTT
TTATTACTTG AAGACATTGG GGAAGAACCG TATCGCGTTG ATCGTATGTT AAATCAACTA
CTCTTATCTG GAAAGTTCAA TGAATGCAGT GGTGTTATTT TTACAAGCTG TCACGACTGT
ACTCCTTCTA AACCATCTCA ATCATTGCAA ACGATACTAT ATGAATATTT CGCACCGTAT
CATATACCTG TCCTATTCGG TTTACCAATT GGACATATAA GCCCAAACAT TGGAATTCCT
CTTGGAGCTA CAGCTACAAT AAGTACACAT AATAAAACAC TCTCTATTTC TTCTGGCGTA
GCCACCCCGT GTTCAAATTA A
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| Protein sequence | MIYPNTLQQG DTVMIIAPSG PPTIENVLKG VKVLQEMGLS VVIGKSVYEK YGYLAGRDQV
RLDDIHEAFS NHEVKAVFCA RGGYGSARLL PHIQYEIIRQ NPKIFWGYSD ITALHTAFSR
YAKLITFHGP MVEELGKGID SLSLSSFNQL FHPYSTILSA SECIVPSSSR TITGQLVGGN
LAVLTSIIGS HYEVHTANKL LLLEDIGEEP YRVDRMLNQL LLSGKFNECS GVIFTSCHDC
TPSKPSQSLQ TILYEYFAPY HIPVLFGLPI GHISPNIGIP LGATATISTH NKTLSISSGV
ATPCSN
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