| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_1142 |
|---|
| Symbol | trpA |
|---|
| ID | 2855333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 1231945 |
|---|
| End bp | 1232721 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637512575 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_035478 |
|---|
| Protein GI | 49477158 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 72 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGTAG AAAGAATTAA AGCAGCATTT GAAAATGGTA AGAAAGCATT TATTCCGTAC
GTAATGGGCG GAGATGGTGG CCTTGAAATA TTAAAAGAAA GAATTCGTTT TCTAGACGAA
GCGGGAGCAA GCATCGTTGA AATTGGTATC CCGTTTTCAG ACCCAGTCGC AGATGGCCCA
ACGATTCAAA GAGCAGGGAA ACGAGCGCTA GATAGCGGTG TAACAGTAAA AGGCATTTTT
CAAGCATTAA TAGAGGTAAG GGAAGAAGTG CAAATTCCGT TTGTACTCAT GACATATTTA
AATCCAGTAC TTGCATTCGG GAAAGAACGA TTTATCGAGA ACTGTATGGA AGCAGGTGTA
GACGGCATCA TCGTTCCAGA CTTACCGTAT GAAGAACAAG ACATTATTGC TCCGTTACTT
CGAGAGGCAA ACATTGCGCT CATTCCACTT GTTACTGTTA CGAGCCCAAT TGAGCGAATC
AAAAAAATTA CGAGTGAATC AGAAGGATTT GTCTACGCCG TTACAGTAGC GGGCGTAACA
GGAGTACGTC AAAATTTTAA AGATGAGATT CATAGTTACT TAGAAAAAGT GAAATCGCAT
ACACATTTAC CGGTAGTGGC AGGGTTCGGT ATTTCAACAA AGGAACATGT GGAAGAAATG
GTTACAATAT GTGATGGTGT TGTCGTTGGA AGTAAAGTGA TTGAGCTATT AGAAAATGAA
AAACGAGAAG AAATATGTGA ATTCATACAG GCAACAAAAC AAAAAGAAGA GGCGTAA
|
|---|
| Protein sequence | MGVERIKAAF ENGKKAFIPY VMGGDGGLEI LKERIRFLDE AGASIVEIGI PFSDPVADGP
TIQRAGKRAL DSGVTVKGIF QALIEVREEV QIPFVLMTYL NPVLAFGKER FIENCMEAGV
DGIIVPDLPY EEQDIIAPLL REANIALIPL VTVTSPIERI KKITSESEGF VYAVTVAGVT
GVRQNFKDEI HSYLEKVKSH THLPVVAGFG ISTKEHVEEM VTICDGVVVG SKVIELLENE
KREEICEFIQ ATKQKEEA
|
|---|
| |