Gene BT9727_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_1116 
SymbolrfbC 
ID2856601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand+ 
Start bp1211086 
End bp1211631 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content36% 
IMG OID637512550 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_035453 
Protein GI49477139 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.0931964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTTA TAGAAACAAA CTTTACCGAC GCAAAATTGT TAGAACCGAG GTTATTTGGA 
GATGAGCGTG GCTTTTTTAC TGAAATTTAT AATAAGAAGG TGCTAGAAAC ATTAGGAGTT 
ACGTATTCAT TTGTACAGGA TAATGTTTCG TATTCGACAG AAGCGGGAAC GATTCGGGGG 
TTACACTTTC AAAAAAATCC GAAAGCACAA ACGAAACTTA TTCAAGTTAT GCAAGGAGCA 
ATCTATGACG TTATCGTAGA TTTGAGAAAA GATTCACCAA CGTTTAAACA GTGGAGAGGA 
TATATTTTAA GTGCGGATAA TCATCGGCAA TTATTAGTGC CAAAAGGATT TGCACATGGT 
TTTTGTACAC TTGTCCCGCA TACGATTGTT ATGTATAAAG TAGATGAGTA TTATAGTGCC 
GATCATGACT CAGGGGTACT TTGGAACGAT AAAGAATTAG CAATTCCATG GCCGGTAACA 
AGTCCTATTT TGTCTGATAA AGATCGAATA TTACCATTAC TTCAGGAATG TGAAGATAGC 
TTTTGA
 
Protein sequence
MEVIETNFTD AKLLEPRLFG DERGFFTEIY NKKVLETLGV TYSFVQDNVS YSTEAGTIRG 
LHFQKNPKAQ TKLIQVMQGA IYDVIVDLRK DSPTFKQWRG YILSADNHRQ LLVPKGFAHG 
FCTLVPHTIV MYKVDEYYSA DHDSGVLWND KELAIPWPVT SPILSDKDRI LPLLQECEDS 
F