Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_1089 |
Symbol | oppA |
ID | 2857617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 1184556 |
End bp | 1186202 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637512523 |
Product | oligopeptide ABC transporter, oligopeptide-binding protein |
Protein accession | YP_035426 |
Protein GI | 49477123 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.231521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA AGATGCCAGT TTTTGTAGTA TCAACAGTAG CAATGAGCAT GATGTTAGGG GCATGTAGCT ACCAAAAAGA TGAGCCGCAA GCGAACGCAA AAGGGGATAG CGGGAAAAGC GGTGCGAAGC AAGTTATTAA CTTAATTGAA ACGCAAGAAA TTCCAACGAT GGATCCAGCG TTGTCAGCTG ATGCAGTTTC TTCAAGAGTA ATGACTAATA CGATGGAAGG CTTATACAGT TTAGGAAAAG ATGATAAGCT TGTTCCAGGT GTAGCGAAGG AATTCCAAAA GTCAGAAGAC GGTAAAAAAT ATACATTTAA ATTACGTGAA GACGCAAAAT GGTCAAATGG TGAGCCTGTG ACGGCAAAAG ATTTCGTATA CGCATGGCAA AGGGCAATTA ACCCAGATAC AGCTGCGAAA TCAGCGTACA TTATGTATGA TATAAAAAAT GCAGAGAAAA TTAATAAAAA AGAGATGAGT CCAGATCAAT TAGGTGTAAA AGCGATTGAT GATTATACAT TAGAAGTGGA ATTAGACAAT TCCATTCCAT ACCTTGTAGA TTTAATGGTA TATCCAATCT TCTATCCTGT GAATGAAAAG TTTGTGAAAG AGCAAGGTAC GAAGTTTGGT TTGGAAGCGA ATACAACGCT TTATAACGGA CCATTTACAT TAAGTGATTG GCAACATGAG CGTAGCTTTA AAATGACAAA GAGTACGTCA TATTGGGACA ATAAAGAAGT GAAGATTGAG GAAGTAAACT TTAACATTGT AAAAGATACG TCTACGCCAA TTAATTTATA TGAAACAAAC GCAGTCGATC GAGCGACGTT ATTAGCAGAG TTCATCGATA AATATAAAGG AAAACCAGAT TTCCAAACAG TAGAGGATAC ATCTGTATTC TTCCTTCGTT TAAATCAAAA AGATCCAGCT TTAGCAAATA AAAATATTCG TAAAGCAATT TCACTTGCTT TTGAACGTAA GCCGTTCGTT GATACATTAT TAAATAACGG TTCTAAGCCA GCAACAGGAT TAATTCCTGA TAACTTCATT AAAGGACCGG ATAAAAAAGA CTTCCGTGCT GTAAATGGAG ATATTGTAAA ACCAAACGTG AAAGAAGCGA AGAAATATTG GGAAGCTGGT AAAAAAGAGC TTGGTAAAAA TGAAATCGAA TTAGAGCTAT TAAATGAAGA CGTTGAATTA TCGAAGAAAA CAGGTGAATA TTTAAAAGGT GAGTTAGAAA AGAATTTACC AGGTTTAACA GTGAAAATTA AACAACAACC ATTCGCGCAA AAACTAAAAT TAGAAGATGC GGGCGATTAT GTCATGTCAT TCTCTGGATG GAGTGCAGAC TTCCCAGATC CAGTTACATA CCTTGATATG TTTGTGACGG ACGGATCGCA AAATAAAATG AAATACTCTA ATCCGAAATA TGATGAAATT ATCATGAAAG CGAAGAAAGA TGGAAGTGAT GTAAATGCTC GTTGGAAAAA CTTACTAGAA GCAGAGAAGA TGCTACTTGA TGACGCTGCG ATTGTTCCAG TATATCAACG AGGTAGAGCA TACTTACAAA GAGATTCAAT TAAAAATATG TACAACCATA AATATGGCGG CGATTTAAGC TTTAAATGGG CGTCAGTAGA GAAATAA
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Protein sequence | MKKKMPVFVV STVAMSMMLG ACSYQKDEPQ ANAKGDSGKS GAKQVINLIE TQEIPTMDPA LSADAVSSRV MTNTMEGLYS LGKDDKLVPG VAKEFQKSED GKKYTFKLRE DAKWSNGEPV TAKDFVYAWQ RAINPDTAAK SAYIMYDIKN AEKINKKEMS PDQLGVKAID DYTLEVELDN SIPYLVDLMV YPIFYPVNEK FVKEQGTKFG LEANTTLYNG PFTLSDWQHE RSFKMTKSTS YWDNKEVKIE EVNFNIVKDT STPINLYETN AVDRATLLAE FIDKYKGKPD FQTVEDTSVF FLRLNQKDPA LANKNIRKAI SLAFERKPFV DTLLNNGSKP ATGLIPDNFI KGPDKKDFRA VNGDIVKPNV KEAKKYWEAG KKELGKNEIE LELLNEDVEL SKKTGEYLKG ELEKNLPGLT VKIKQQPFAQ KLKLEDAGDY VMSFSGWSAD FPDPVTYLDM FVTDGSQNKM KYSNPKYDEI IMKAKKDGSD VNARWKNLLE AEKMLLDDAA IVPVYQRGRA YLQRDSIKNM YNHKYGGDLS FKWASVEK
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