Gene BT9727_1012 details

Gene Information

• Locus tag: BT9727_1012
• Symbol: sigM
• ID: 2857087
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus thuringiensis serovar konkukian str. 97-27
• Kingdom: Bacteria
• Replicon accession: NC_005957
• Strand: -
• Start bp: 1109693
• End bp: 1110178
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637512447
• Product: RNA polymerase sigma factor
• Protein accession: YP_035350
• Protein GI: 49477092
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family; [TIGR02950] RNA polymerase sigma factor, SigM family

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 0.0309299
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAACGTA AACAATCATT AGAAGACATT TATTCCGATC ATATGCATGA TTTATTTCGC 
TATCTTCTCT CCCTAACCGG AGATTCTCAT TTTGCTGAAG ATCTCATGCA AGAAACATTT 
TACCGCATGC TCGTCCATAT TGATTATTAC AAAGGCGAAG AAATTAGACC GTGGTTATTT 
ACAATTGCCT ACAACGCCTT TATCGATTGG TATCGAAAAG AGAAAAAATA TAAAACAACA 
GAGGTTGCAG AATTCCATTT ACCAAACGTG CCAAGTACAG AACATGAATA TTTCGTAAAA 
TATGAGATTG CTAGTTGGTT AGACAGTTTA TCTTCTCTTC CGCTCGAGAG ACGAAATGTT 
CTGTTACTAC GAGATTACTA CGGATTCTCG TATAAGGAAA TAGCAGAAAT GACTTGTCTC 
TCATTAGCAA AAGTGAAGAT TGAATTACAC CGGGGACGAA AAGAAACGAA AAGCATAAAG 
GAGTGA 

 

Protein sequence

MKRKQSLEDI YSDHMHDLFR YLLSLTGDSH FAEDLMQETF YRMLVHIDYY KGEEIRPWLF 
TIAYNAFIDW YRKEKKYKTT EVAEFHLPNV PSTEHEYFVK YEIASWLDSL SSLPLERRNV 
LLLRDYYGFS YKEIAEMTCL SLAKVKIELH RGRKETKSIK E