| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0888 |
|---|
| Symbol | |
|---|
| ID | 2854894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 988826 |
|---|
| End bp | 989392 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637512325 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_035228 |
|---|
| Protein GI | 49477031 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02366] probable dihydroxyacetone kinase regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 0.845655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTT CTATAATTTC TAAAAAGATA ATCGCGAACT CATTGAAGTA TTTAATGGAA
ACAGAGTCGT TTCATAAAAT ATCAGTGAGC GATATTATGT TACACTGTCA AATGCGTAGG
CAAACTTTTT ATTATCATTT TAAAGATAAA TTTGAACTAT TAAGCTGGAT TTATAGAGAA
GAAACGAAAG AAAACATTAT CGACTTTCTC GACTATGAAA CATGGGAAAA TATTTTCGAT
TTATTATTTG ATTACTTTTA TGAAAATCAA AAATTTTACC GAAATGCTTT TAAAGTCATT
GAACAAAACT CGTTTAATCA CTATTTATTT GAGCATACGA AAAACTTATA CATGAAAATT
ATTGATGAAC TATCTGTGAG CTGCGGATTC AGCCTTTCTG ATGAGACAAA AAATACGATT
GCCTCCTTTT ATAGTCACGG CTTCGTCGGA ACGATAAAAG ATTGGATTGA AAGCAAATGC
GAAGTAGATC CTTCCATTAT GTCTTCTCTC ATGAAAAATA TGATAAACAA TCAATTACTA
CTATTACTGG AGCAATCAGC AAAGTAA
|
|---|
| Protein sequence | MTSSIISKKI IANSLKYLME TESFHKISVS DIMLHCQMRR QTFYYHFKDK FELLSWIYRE
ETKENIIDFL DYETWENIFD LLFDYFYENQ KFYRNAFKVI EQNSFNHYLF EHTKNLYMKI
IDELSVSCGF SLSDETKNTI ASFYSHGFVG TIKDWIESKC EVDPSIMSSL MKNMINNQLL
LLLEQSAK
|
|---|
| |