| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0859 |
|---|
| Symbol | |
|---|
| ID | 2857258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 964944 |
|---|
| End bp | 965543 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 23% |
|---|
| IMG OID | 637512298 |
|---|
| Product | RNA polymerase sigma-B factor (sigma-37) (general stress protein84) (GSP84) |
|---|
| Protein accession | YP_035202 |
|---|
| Protein GI | 49477012 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.000000188257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACATA ACCAACTTGA TGTATTTTAT GAGAAGTATC AAGATAAATT AAATCAACCC
ATTGTTGAAA GTTTTTTAAG AGAAGATAAA AATTACTTTT TGTTTAAAAA TGCAATTATA
GATCCAACTG AAGAAAATAA ACACAGATTA GATTTAGCTT TTAAACAACA CTATAAACAA
GTAAAAATGA TTAGTTACAT TAGTAAACTT ATATATTTTT ATTCGATTGA TTTTGATAAA
AAGATTTCTC TTAATAATCA AAGACAATTA TTAAATCTTG ATACCCCTAT TTCTACAGAA
GAAAATAATA CTACTTCAAA ACTTGATATT TTGACATCTT CAAAAGAGGA TTTAACTTAT
TTAGAATTTG AAAATATACA GAAAGATATT AAAGAGCATA TTTCTAACGA CATCTTATTT
GCATCTTTAA ATCTTTTATC AGACAAGCAA TTGGAGATTT TAAAATTAAT TTATATAGTT
AATTATAACA ACAAGGAAGT TGCTAAACTA TTAGGGGAGT CAGAACAAAC TGTTTCTTAT
AATCATAAAA AAGCCATTAA AAAATTAAGA AATTCTATGA ATTTTAAAAA TGAGGTGTAA
|
|---|
| Protein sequence | MGHNQLDVFY EKYQDKLNQP IVESFLREDK NYFLFKNAII DPTEENKHRL DLAFKQHYKQ
VKMISYISKL IYFYSIDFDK KISLNNQRQL LNLDTPISTE ENNTTSKLDI LTSSKEDLTY
LEFENIQKDI KEHISNDILF ASLNLLSDKQ LEILKLIYIV NYNNKEVAKL LGESEQTVSY
NHKKAIKKLR NSMNFKNEV
|
|---|
| |