Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_0825 |
Symbol | oppD |
ID | 2856457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 926670 |
End bp | 927662 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637512264 |
Product | oligopeptide ABC transporter, ATP-binding protein |
Protein accession | YP_035168 |
Protein GI | 49476983 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCTGAAA AACTACTAGA AGTGAAAAAT TTAAAGACTT CTTTTTTCAT AGAAAGTGGC GAAGTTGAAG CGGTTCGCGG CGTTACATTT CGCTTAAATA AAGGAGAAGT AGTCGGTATC GTTGGGGAAT CTGGAAGCGG GAAGAGTGTA ATGGCGAAGT CTGTTATGTC TCTCGTTACG TCACCAGGAA AAGTGAAAGA AGGGGAAATC CTTTTTCATA ATGAAAACAT ACTTTCTAAA TCTGAAAAAG AATTGCGTTC TATTAGAGGA AATCAAATTT CACTTATCTC TCAAGATCCA ATGTCTGCGC TAAATCCAGT CGTGAAAATT GGAAAGCAAA TGACGGAAGT AATTATACGG CATCAAAAAG TAAAAAAGAA AGAAGCAGAG CAGATTGCGG TTAACTTACT AAAACAAGTC GGTCTTTCGT CGCCAGAAGA AAGGGTAAAA CAATATCCGC ACGAACTAAG CGGTGGTATG AAGCAGCGGG TTATGATTGC GATGGCAATG TCTTGTAATC CAGATCTTCT CATTGCGGAT GAACCGACGA CAGCGCTTGA TGTAACGATA CAAGCACAAA TACTAGATTT AATGAAAAAC TTAAAAAATA AAACGAACAT GGCGTTACTT CTTATTACGC ATGACTTAGG AATAGTCGCG CAAAACTGTA CACGCGTTAT CGTTATGTAT GGCGGGCTTA TTATGGAAGA AGGACCCGTA CTTGATATTT TCCAATCGCC GAATCATCCA TATACGAAAG GGCTATTAAA CTCTTTGCCA AAAATAGCGA ACGGCGTAAA AGAAAGACTC GCTCCTATTC AAGGTGTAAC ACCAAACTTA TTAAACCCAC CACAAGGTTG CCCATTCGCA GAGCGTTGCC CGCATGCGAT GGATATTTGT GAAAAAGAAC GTCCGCCATA TTTTGAAATC GGAAACGAAA GACGTTCCAT GTGCTGGTTA AACGATAAGA CAGTAGGTGA ATCACATGCA TGA
|
Protein sequence | MSEKLLEVKN LKTSFFIESG EVEAVRGVTF RLNKGEVVGI VGESGSGKSV MAKSVMSLVT SPGKVKEGEI LFHNENILSK SEKELRSIRG NQISLISQDP MSALNPVVKI GKQMTEVIIR HQKVKKKEAE QIAVNLLKQV GLSSPEERVK QYPHELSGGM KQRVMIAMAM SCNPDLLIAD EPTTALDVTI QAQILDLMKN LKNKTNMALL LITHDLGIVA QNCTRVIVMY GGLIMEEGPV LDIFQSPNHP YTKGLLNSLP KIANGVKERL APIQGVTPNL LNPPQGCPFA ERCPHAMDIC EKERPPYFEI GNERRSMCWL NDKTVGESHA
|
| |