Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_0788 |
Symbol | lytB/lytA |
ID | 2854576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 892662 |
End bp | 894509 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637512228 |
Product | S-layer protein, peptidoglycan endo-beta-N-acetylglucosaminidase and N-acetylmuramoyl-L-alanine amidase fusion |
Protein accession | YP_035132 |
Protein GI | 49476957 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4193] Beta- N-acetylglucosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000000356588 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGACAT TTTCAAAAGG TATTACAGCA GTTGCGTTAA CGGGGTCATT GCTTTTAACT CCTATTTCAA GTTATGCGGC AAGTGATGAT ATTACAAATC ATCTATTTGA GCAGCATATG CGCACTCTTA TTAATAAAGG GATCATGTCA GGGTATGGAA ATAATGTATA TTTACCTGAC AAAGAGATAA CGAGAGCAGA GTTTGCTACA TTAGTAGCGA AAGCCCTGCA ACTTCCACAA GCAGATTCGA ATTTTAATGA TGTGCCTAAA TCATACGGCT TATATGACGG TGTAAGTAGA GCATTCGGAG CAGGAATTAT TAAAGGGCGT AGTCCTGAGA CTTTTGCACC AAACGATGTG ATTACACGTG AAGAAATGGC AGTAATGGTA AAACATGCGC TAGACTATAA AAATATTAAA GTAACTGTAA ACCCACTTAC ATTTGCTGAT ACAAATCGTA TTAACTATAA AGAACATGTA CAAGTTATGG TAGCTACTAA AATTATTAGT GGATATCCAG AAGATAATAC ATTTAGACCA CAATTATCAG CAACAAGAGG TATGGCTTCG GCGATGCTAA ACTTAATGCT TGATAAAATT GGGAATAACG GTGGGGAAAC ACCAGTAGAA ACAAAGAATT ATGTATTGTT AAATGATGCA GGCAAAATAG TAGAGCGTTA CACTACATAT AAAGAAGCTG TTACAGCTGC ACAAAATAAA GGAATCAATG CAGTGAAATA TGAAAATGAA TACGTATGGA TTAAAGGTGG CTTTGCCGCG GCGAAGCAAA TTTCTGGAGA TACAATTAAT GTGTACGGTG ATAATTTACA AACAGTATAT ACGTACATTC AGTATGGAAC GGAATTTAAA GTGTTAGAAG TTGGAGAAGA TCGTGTGAAA GTACAACTCT CTGATTTAAC AGGTTATGTA AAGAAAAATG AAGTTACTTT AATTCCTGAA AATGAAATGA AGAAGTCATC TTATTACGTA AAATCAGATG GATATTTATA TCACAGATAT TTCACGTATA ATACAAGCAC GCCTAAATAT ACAGAATATA GATTTGGTGC AGCCCCTTCG TTCATGAAGC AAGGGCAATC AATGTATAGT GTAGATGGAA AAACATTCGG AAATGAAACA TTCTATCAAT ATTTTAATTA CGTATCATTA CGTTCTAAAA CAGAGTACAC AGCAGAACAA TTAGATAGTT ATATAAAATC AGTTAAAGCC GATTCTCCAT TAATCGGTTT AGGTGCGAAA TTTAAAGAAG TAGAAAGTAA GTATAATGTA AATGCATTAT TCCTATATTC ATTAGCAGCT CATGAGAGTG ATTTTGGGAC AAGTAGGCTT GCGCGAGAAA AAAATAATTT ATTTGGCTTA AATGCAACAG ATAATAGTCC ATTTGGTAAC GGTCTATCAT TTAATTCAAA AGAAGATTGT ATTGAACATG CTGCAAAAGT ATATATGAGT GAAGGTTATT TAAATCCAGG ACATTGGCGT TATACTGCAA CATATACAGG TGATAAAGCA GGCGGTTTAA ATATGAAATA TGCATCTGAT GCAAACTGGG GTAAAAAAGT AGCTGGGCAT ATGTTCCGTT TTGATTCGTA CTTAGGTAAA AAAGAGTACA ACAAATATAA GCTTGCACGT GTAACGAATA AGGTAGAAGC GAAAAAAGAT CCTCGTACGT CGAATGAACG ACTGTATAAC TTAGCGGCAA ATAAAGTTGT TACGATTACA GGCGAAGAAA CGATAAATGG ACAAGCATGG GTTAAAATCA TTTCTGATGA TCCTGCTGTA AATGAAGCGT ATGTTGCAAA AGAAAATGTG CAGTACGTAA AACATTAA
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Protein sequence | MKTFSKGITA VALTGSLLLT PISSYAASDD ITNHLFEQHM RTLINKGIMS GYGNNVYLPD KEITRAEFAT LVAKALQLPQ ADSNFNDVPK SYGLYDGVSR AFGAGIIKGR SPETFAPNDV ITREEMAVMV KHALDYKNIK VTVNPLTFAD TNRINYKEHV QVMVATKIIS GYPEDNTFRP QLSATRGMAS AMLNLMLDKI GNNGGETPVE TKNYVLLNDA GKIVERYTTY KEAVTAAQNK GINAVKYENE YVWIKGGFAA AKQISGDTIN VYGDNLQTVY TYIQYGTEFK VLEVGEDRVK VQLSDLTGYV KKNEVTLIPE NEMKKSSYYV KSDGYLYHRY FTYNTSTPKY TEYRFGAAPS FMKQGQSMYS VDGKTFGNET FYQYFNYVSL RSKTEYTAEQ LDSYIKSVKA DSPLIGLGAK FKEVESKYNV NALFLYSLAA HESDFGTSRL AREKNNLFGL NATDNSPFGN GLSFNSKEDC IEHAAKVYMS EGYLNPGHWR YTATYTGDKA GGLNMKYASD ANWGKKVAGH MFRFDSYLGK KEYNKYKLAR VTNKVEAKKD PRTSNERLYN LAANKVVTIT GEETINGQAW VKIISDDPAV NEAYVAKENV QYVKH
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