| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0785 |
|---|
| Symbol | csaA |
|---|
| ID | 2853706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 888216 |
|---|
| End bp | 889736 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637512225 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_035129 |
|---|
| Protein GI | 49480216 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGA AGTTTGTAAA AGGTGCAGCA ATTTTAACAA TTACAACTTT TTTGTCGAAA
TTGCTTGGTA GTTTTTTTCA AATTCCGTTA CAAAATATTG CAGGAGATGA AGTACTTGGT
ATTTTTCGCC TCGTGTTTCC TGTATATATG ATTGCCCTTA CCTTATCAGT AGCTGGTGTC
CCATTGGCAA TTTCAAAATT GATTGCAGAG TTGAATGAAA AAAATAAGCA TAAAGAAATT
GCGAAATTAT TTAAATCGGC ATCGATTATA GGGATGGCAT TTGGAATATT TGGATGTCTA
GTGATCGTGT TATTTTCTAC TGAAATTGCA AGTATGCTTG GTGGACAAGA AACGAGGATG
CCCTTACTGG TTACGTCATT GGCCTTACTC GTTGCACCAT ATATGGCGGT TTATCGTGGG
TATTTTCAAG GATTCGGTGA CATGAAACCG ACGGGGATAT CACAAGTCAT TGAGCAATTT
GTACGAGTAT TTTTTATGTT AATTATCGCT TATATATTAG TATATTGGAA TGAAAGTAGT
GCTATCATTA CTAGTGGGGC AATGGTTGGA TCTTTTCTTG GGGTAATAAG TTCACTTATA
TATTTACGTA TGACGTACAA TAAAAGTTCA TACCGATATA AGAGCAACTC GTATTCACTA
CAAGATTTGA AAAAAGATGG AAAGAAAATA TTGCAAGTAT CTATTCCGAT TGCTATTGGA
GCTTTATCCA TGCCGCTTTT AAATTTGGTG GATTCGCTAA CAGTGCCGCA CGTGCTGCAA
GGATCGTCAG CCGAAATTCA ATCGCAATTT GGTATATATA GCCGCGGTTC TGCATTTACA
CAATTAATCG TTGTTTTCGC AAGCGCAATT GTATTTCCAT TAATACCATT ATTAACGTCT
GCACTAGCAA AAAAAGATAT GAATTTAGCA AAAACGACAG TCCAAAATAC GAACTCACTT
ATGCATGTGC TAACAGCCCC GTTAACAATC TGGTTAATTG CATTAGCAGT TCCGTTAAAT
GTGGGATTGT TTACAGATGC GAAAGGAAGC AGTATGTTGG CTGTTATGAT TGGTAGTTCG
TATTTCACAT CGGTTATGGT ATTATCAATA GGAGTTTTAC AAGGAATTAA TCGCTCTGCC
CAAGCTGCGT GGATTGTTAT CGGCGCAAGT TTTGTGAAAT GTTTATTAAA CATAGTATTA
ACAAAAAAGT TTGGCATAGA TGGAGCGGCG TATAGTACAT TGATTATATA TGTGTTAATC
TGTATCGTAA ATCATCTGTA CATTCGAAAA TATCTTTCCT ATTCTGTTCA CATAGGAAGA
TTTTTTATTG TAATAGGTGT ATCTTGTATT TTAGGATTAG GACTATATGA ACTATCTACT
ATAATAGATG TTACATCTTC AAGAATTATT GCGTTATTAT ATAGTGGTGT AGCACTTGCT
ATTGCAATCA TTTTGTATGC GGTATGTGCT TTGAAATTAA ACTGGATATC AAAAAAACAA
ATACCATTTT TGAAAAAATG A
|
|---|
| Protein sequence | MNKKFVKGAA ILTITTFLSK LLGSFFQIPL QNIAGDEVLG IFRLVFPVYM IALTLSVAGV
PLAISKLIAE LNEKNKHKEI AKLFKSASII GMAFGIFGCL VIVLFSTEIA SMLGGQETRM
PLLVTSLALL VAPYMAVYRG YFQGFGDMKP TGISQVIEQF VRVFFMLIIA YILVYWNESS
AIITSGAMVG SFLGVISSLI YLRMTYNKSS YRYKSNSYSL QDLKKDGKKI LQVSIPIAIG
ALSMPLLNLV DSLTVPHVLQ GSSAEIQSQF GIYSRGSAFT QLIVVFASAI VFPLIPLLTS
ALAKKDMNLA KTTVQNTNSL MHVLTAPLTI WLIALAVPLN VGLFTDAKGS SMLAVMIGSS
YFTSVMVLSI GVLQGINRSA QAAWIVIGAS FVKCLLNIVL TKKFGIDGAA YSTLIIYVLI
CIVNHLYIRK YLSYSVHIGR FFIVIGVSCI LGLGLYELST IIDVTSSRII ALLYSGVALA
IAIILYAVCA LKLNWISKKQ IPFLKK
|
|---|
| |