| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0568 |
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| Symbol | oppC |
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| ID | 2858620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | - |
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| Start bp | 665137 |
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| End bp | 666042 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637511987 |
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| Product | oligopeptide ABC transporter, permease |
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| Protein accession | YP_034914 |
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| Protein GI | 49476858 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGTAA ATCCTGAAAA ACAAACAGAA ATAATTCAGT ATGAGAAAAG TCCATCAGGT
TTCTCTATTA TGTGGAGAGA GTTTCGTAAA GATAAATTAG CAATGTTCTC ACTTGTCTTT
CTTACTCTTC TACTACTAGG TGTTTATATA ACTTCATTTA TTATGAAACA AGAAGATATT
GTACGAGTAG ACTTATTTGC AATATATTCA CCACCTTCTG TTGAACATTT GTTAGGTACA
GACTATGGAG GCCGTGATAT TTTTGGACAA CTTATAATTG GTACACGTAA CTCATTTACA
ATTGGCTTAG TTATTACCGC CATCACATGC TTTATCGGTA TGACTATTGG TCTCATCGCA
GGTTACTTTG GCGGAAAAAT TGACAATATG ATTATGCGTA TTATTGATTT CATTATTGTT
TTACCTTTCT TAATGATTGT AATTGTTTTC ATTACAATTG TCCCAAAGTT CAATGTACTT
ACATTTATTT TAATTATGAG CATGTTTTTA TGGACTGGTA AAGCACGTTT AATTCGTTCT
AAAGTCCTAG CGGAAAAAGA GTTAGATTAT GTATCAGCTT CAAAAACATT AGGAACACCT
AATTGGAAAA TCATAACTTT TCAAGTGTTA CCTAATTTAA GTTCTATTAT TATCGTAAGT
GTCACATTAA ACCTTGCGGG TAATATCGGT ATCGAATCTG GACTAACATT TTTAGGCTTT
GGTCTCCCAG AAAGTACACC GAGTCTCGGG ACACTTGTTA GTTATGCAAC AAACCCAGAT
GTATTACAAG AGAAATGGTG GATTTGGTTA CCTGCATCAA TCATGATTTT AGTGTTGATG
TTGAGTATAA ATTTTATCGG CCAAGCGCTA CAACGTGCAG CTGATGCAAG ACAAAGAAAA
GGTTAA
|
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| Protein sequence | MLVNPEKQTE IIQYEKSPSG FSIMWREFRK DKLAMFSLVF LTLLLLGVYI TSFIMKQEDI
VRVDLFAIYS PPSVEHLLGT DYGGRDIFGQ LIIGTRNSFT IGLVITAITC FIGMTIGLIA
GYFGGKIDNM IMRIIDFIIV LPFLMIVIVF ITIVPKFNVL TFILIMSMFL WTGKARLIRS
KVLAEKELDY VSASKTLGTP NWKIITFQVL PNLSSIIIVS VTLNLAGNIG IESGLTFLGF
GLPESTPSLG TLVSYATNPD VLQEKWWIWL PASIMILVLM LSINFIGQAL QRAADARQRK
G
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