| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0542 |
|---|
| Symbol | treB |
|---|
| ID | 2854646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 637733 |
|---|
| End bp | 639160 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637511962 |
|---|
| Product | protein-N(pi)-phosphohistidine-sugar phosphotransferase (PTS system, trehalose-specific IIBC component) |
|---|
| Protein accession | YP_034889 |
|---|
| Protein GI | 49480220 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
|---|
| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01992] PTS system, trehalose-specific IIBC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAAG ACTATCGTAA AACAGCAGAG GAAGTGTTGC AGTATATTGG TGGGAAAGAC
AATATTGAAC AAGCTGCGCA CTGTGTAACG AGACTCCGTA TCGCTTTAAA AGATGAAAGT
AAAATAGATA ACGATAAATT ACAGTCTGTT TCATTAGTAA AGGGAGCGTT TCATAACGCT
GGGGTATTTC AAATTGTAAT CGGTCCAGGA GATGTGGATC GAGTATATGC CGAATTGATA
ACGCTTGCAG GCATGAAGGA AGCGACAGTA GCTGACGTAA AAGATTCCGG GAATCAAAAG
CTAAATCCAG CTCAAAAGTT TGTAAAAGTA TTTTCAGATG TATTTATGCC GATATTACCA
GCAATCGTAA CAGCTGGTTT ACTAATGGGA ATTAACAATC TATTAGGGGC AAAGGACTTA
TTTTTTGAAG GTAAAAATTT ATTAGATGTG TATCCAAACT TAAGTGGGCT TTGGGATTTA
ATTAATATGA TGGCGAATAC AGCATTCGTA TTCTTACCGG CACTTGTCGG GTGGTCAGCA
ACGAAGCGTT TTGGTGGTAG TCCAATACTA GGGATTGTTA TGGGATTAAT GCTTGTGCAC
CCAGCCTTAT TAAATGCCTG GGACTATGGA AAAGCAGCGA CTGGTTTAGA TGGTCAAAAG
ATTGAGTACT TCAATATTTT AGGACTGTTC CAAATTGAGA AGGTAGGATA TCAAGGTCAA
ATCTTGCCAG TTTTAGTAGC AGCATTTGTA TTAAGTAAAG TGGAAATCTT CTTAAAGAAA
CATGTACCAA ATGCAATTCA ATTGTTAGTT GTACCCATTA CAACGATTGT CGTAACAGGT
GTGTTAGCAT TAGGGATTAT TGGTCCGGTT ACACGTCATA TTGGAGATTT ATTAACAGCT
GGATTAGTAG GTGTATATGA AACAGTACCA GTAGTTGGAG CAGTATTATT TGGAGCATTG
TATGCACCAC TTGTAATTAC AGGTATGCAT CATATGTTTA TTGCTATCGA TTTACAATTA
ATTGCACAAC ACGGTGGTAC ATTCATTTGG CCAATGATTG CTCTTTCTAA CATTGCGCAA
GGTAGTGCGG CACTTGCGAT GTTCTGGATT TCTAAAAATC AAAATGATAA AAGTATGGCA
TCGACATCAG CAATTTCGGC CTATTTTGGT ATTACAGAGC CAGCTATGTT TGGTGTGAAT
TTACGAAATA AATTCCCGTT CTATGCAGCG ATTATAGGAT CTGCTGTGGC GGCGATATTC
ATTACATTAA ATGGTGTATT AGCACCTGCT ATCGGAATTG GCGGATTACC AGCATTTATT
TCTATCATTC CGAAATCGAT TCCAATGTTT ATTGTAGGAA TGGTTATCGC AGTTGTCATC
CCATTCACGT TAACGTGGTT ATTTGCAAAA AGAGTGAAAC AGAAGTAG
|
|---|
| Protein sequence | MGKDYRKTAE EVLQYIGGKD NIEQAAHCVT RLRIALKDES KIDNDKLQSV SLVKGAFHNA
GVFQIVIGPG DVDRVYAELI TLAGMKEATV ADVKDSGNQK LNPAQKFVKV FSDVFMPILP
AIVTAGLLMG INNLLGAKDL FFEGKNLLDV YPNLSGLWDL INMMANTAFV FLPALVGWSA
TKRFGGSPIL GIVMGLMLVH PALLNAWDYG KAATGLDGQK IEYFNILGLF QIEKVGYQGQ
ILPVLVAAFV LSKVEIFLKK HVPNAIQLLV VPITTIVVTG VLALGIIGPV TRHIGDLLTA
GLVGVYETVP VVGAVLFGAL YAPLVITGMH HMFIAIDLQL IAQHGGTFIW PMIALSNIAQ
GSAALAMFWI SKNQNDKSMA STSAISAYFG ITEPAMFGVN LRNKFPFYAA IIGSAVAAIF
ITLNGVLAPA IGIGGLPAFI SIIPKSIPMF IVGMVIAVVI PFTLTWLFAK RVKQK
|
|---|
| |