| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0465 |
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| Symbol | opuD |
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| ID | 2855499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | - |
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| Start bp | 545173 |
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| End bp | 546723 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637511886 |
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| Product | glycine betaine transporter |
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| Protein accession | YP_034813 |
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| Protein GI | 49480149 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00194055 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA AAGAAAACAG TGTATTCTAT ATCTCCATCT TGCTAACAAC ATTATTTATC
ATATGGGGAA TTACCCCGGC AAGTTGGATA CAAGGCTATG ATTTACAAAG CGTTACATCT
TCTTTAAACT CATTTATCCT CAATAAATTT GGATGGTTTT ACTCTCTACT TATGACTGCA
ATGATTATTT TAGCCACGTA TTTAGCATTC TCTAAATACG GTTCTATTCG TCTTGGTAAA
GATGGAGAAA AACCAAAGTA TAGTTATCCA TCTTGGCTAT CCATGTTGTT TGGAGCAGGA
ATGGGAATTG GACTCCTCTT TTATGGAATC GCTGAACCGA TTTCACATTT TACAGATCCA
TTAACAGGAA AAGCAGGTAC AGAGGAAAGT GCCAAACTCG CTATGCAATA TTCATTTTTC
CACTGGGGCC TCTTTCCATG GGCACTATAC GCAATGGTTG CTTTAACAAT TGCATATTTC
ACATTCCGCA AACAAAAAGG TAGCACAATT GGCGCTACAG TTACTCCATT ATTTAATCGA
TCGAAGAATT CTCCTATCGG AAAAACAGTT GATATTTTAG CTGTTTTAGC CACAGTATTT
GGTATTGTGC CATCTGTTGG GATTGGTGCT CAACAAATCG CCGGAGGATT AAGCTATTTA
TTCCCTTCTA TTCATAACAC TTTACTTACA CAGCTCGTAC TTATCGCCAT CTTCGCTGTT
TTATATTTAA CAAGTGCACA AACAGGCCTA GATCGTGGGA TTAAATATTT GAGTAACTTA
AATTTCTCTC TTGCAGGTAT ATTACTCGTC TCCTTTTTAC TTTTAGGACC AACTGTATTT
ATTATGAAAT ATTTCACATC TACACTCGGT TCTTATATTG GAGCTTTACC TAGTATGGGA
TTAAATTTAG GAGCATTTAA TGAAAAATCT TCTTCTTGGA TAGAAAACTG GACTATTTTC
TATTGGGGAT GGTGGATCTC CTGGTCTCCA TTCGTCGGTA CATTCATCGC CCGTATTTCT
AAAGGGCGCA CAATAAAAGA ATTTATTTTT GGAGTTGTAT TAGTCCCAAC TCTCATCTGC
ACATTTTGGT TTGCAGTATT TGGCGGCACC GCTATCCATA TGGAAATGTT CCAATCCCTT
GGAGTAGCTG ATGAAATCGC AAAAAACGGG ACAGAGATTG GATTATTTGC TGTTATTTCA
CATCTACCGT TCTCTACATT TTTAACAATT ATCGGGTTAA TTTTAGTAGC CACATTTTTC
GTTACTTCTG CCGACTCGGC AACATTTGTT GTTTCTATGC AAACGAGTAA CGGAAGCTTA
TCACCGAAAA ATAGTTTGAA ACTTATATGG GGATTAACAA TCGCGATAAT CGCAGCTATT
TTATTACAAG CTGGAGGATT AAATGCACTA CAAATTGCAG CTATAATCGC AGCACTACCA
TTTTCTATCG TAGTCGTTCT TATGGTTACT TCGCTCTTTA AAGAGCTCCG AAAAGAAGAT
ATTAATTCGC AAACGAAAGA AGTTCCGAAA AAAATAAAAA AGGTTATATA A
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| Protein sequence | MIKKENSVFY ISILLTTLFI IWGITPASWI QGYDLQSVTS SLNSFILNKF GWFYSLLMTA
MIILATYLAF SKYGSIRLGK DGEKPKYSYP SWLSMLFGAG MGIGLLFYGI AEPISHFTDP
LTGKAGTEES AKLAMQYSFF HWGLFPWALY AMVALTIAYF TFRKQKGSTI GATVTPLFNR
SKNSPIGKTV DILAVLATVF GIVPSVGIGA QQIAGGLSYL FPSIHNTLLT QLVLIAIFAV
LYLTSAQTGL DRGIKYLSNL NFSLAGILLV SFLLLGPTVF IMKYFTSTLG SYIGALPSMG
LNLGAFNEKS SSWIENWTIF YWGWWISWSP FVGTFIARIS KGRTIKEFIF GVVLVPTLIC
TFWFAVFGGT AIHMEMFQSL GVADEIAKNG TEIGLFAVIS HLPFSTFLTI IGLILVATFF
VTSADSATFV VSMQTSNGSL SPKNSLKLIW GLTIAIIAAI LLQAGGLNAL QIAAIIAALP
FSIVVVLMVT SLFKELRKED INSQTKEVPK KIKKVI
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