Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_0351 |
Symbol | topB |
ID | 2854433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 415480 |
End bp | 417669 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637511755 |
Product | DNA topoisomerase III |
Protein accession | YP_034701 |
Protein GI | 49479036 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA GCGTTGTAAT CGCTGAAAAA CCTTCCGTTG CACGAGATAT TGCGCGTGTA CTGAAGTGCG ACAAAAAAGG AAATGGCTAC CTTGAAGGTA GTAAATATAT TGTAACTTGG GCTCTAGGTC ATCTTGTTAC ATTAGCTGAT CCAGAAAGCT ATGATGTGAA ATATAAAAAG TGGAATTTAG AAGATTTACC GATGCTGCCT GAGCGTTTGA AATTAACTGT TATTAAACAA ACAGGGAAAC AATTTAATGC TGTAAAAAGT CAGCTTCTTA GAAAAGATGT AAATGAAATC ATTGTAGCAA CAGACGCTGG ACGCGAAGGA GAATTGGTTG CTCGTTGGAT TATTGATAAG GTTCGAATTA ACAAACCAAT TAAACGTCTA TGGATTTCAT CTGTTACTGA TAAAGCAATT AAAGATGGTT TCGCAAATTT AAAACCAGGT AAAGCATATG ACAATTTATA CGCTTCAGCT GTCGCACGTT CAGAAGCTGA CTGGTATATC GGTCTTAACG CGACTCGAGC TTTAACGACT CGCTTTAATG CCCAGCTTAA CTGTGGCCGT GTGCAAACAC CTACTGTTGC TATGATCGCT AATCGTGAAG ATGAAATAAA GAACTTCAAA GCTCAAACTT ACTACGGCAT TGAAGCTCAA ACAACAAATC AATTAAAACT AACGTGGCAA GATGCAAATG GCAATAGCCG CAGTTTTAAT AAAGAAAAAA TTGATGGTAT TGTAAAAGGT TTAGATAAAC ATAATGCTAC TGTTTTAGAA ATTGATAAAA AACAGAAGAA GTCATTCTCT CCTGGTCTTT ACGATTTAAC TGAATTGCAA CGTGATGCCA ATAAAAAGTT CGGTTACTCT GCGAAAGAAA CATTGAATAT TATGCAGAAA TTGTATGAGC AACATAAAGT GCTAACATAC CCCCGTACAG ATTCTCGTTA CATTTCATCT GATATCGTTG GAACACTTCC AGAACGTCTA AAGGCGTGCG GCGTTGGGGA ATATCGTCCT TTAGCGCATA AAGTATTACA AAAGCCTATC AAGGCTAATA AATCATTTGT TGATGATAGT AAAGTAAGCG ATCACCACGC AATTATTCCG ACAGAAGGAT ACGTTAACTT CTCAGCCTTC ACAGATAAAG AACGTAAAAT TTATGATTTA GTTGTAAAAC GTTTCTTAGC TGTTTTATTC CCAGCATTCG AATACGAACA ACTAACGTTA CGCACAAAGG TCGGCAATGA AACATTCATT GCACGCGGAA AGACAATTTT ACATGCCGGT TGGAAAGAAG TATATGAAAA TCGCTTTGAA GATGATGATG TAACTGATGA CGTAAAAGAG CAACTTTTAC CTCGCATTGA AAAAGGTGAT ACATTAACTG TAAAGTTAAT TATGCAAACA TCAGGTCAAA CGAAAGCACC TGCACGTTTT AACGAAGCGA CTTTACTTTC AGCAATGGAA AATCCTACAA AATATATGGA TACGCAAAAT AAACAACTTG CTGATACGTT AAAATCAACT GGTGGATTAG GTACTGTGGC AACACGAGCT GATATTATCG ACAAGCTATT CAATTCATTC TTAATTGAAA AACGCGGTAA AGATATTCAC ATTACTTCAA AAGGCCGTCA GTTACTTGAT TTAGTACCAG AAGAGTTAAA ATCACCTACA CTAACTGGTG AGTGGGAACA AAAGCTAGAG GCAATTGCAA AGGGTAAACT GAAAAAAGAA GTATTCATTT CCGAAATGAA GAACTATACG AAAGAAATTG TTTCTGAAAT TAAATCGAGT GATAAAAAAT ATAAACATGA CAACATTTCA ACGAAGTCTT GTCCAGACTG CGGTAAACCA ATGCTAGAGG TAAACGGCAA AAAAGGAAAA ATGCTCGTTT GCCAAGACCG TGAATGTGGT CATCGTAAAA ACGTATCTCG TACAACAAAC GCTCGCTGTC CGCAATGTAA GAAGAAATTA GAATTACGTG GTGAAGGTGC AGGACAAATC TTTGCATGTA AATGTGGCTA TCGCGAGAAA TTATCCACGT TCCAAGAAAG ACGTAAAAAA GAATCTGGAA ATAAAGCTGA TAAACGTGAC GTTCAAAAAT ATATGAAACA ACAGAAAAAA GAAGAAGAAC CATTAAATAA CCCATTTGCA GAAGCATTAA AAAAATTAAA ATTTGATTAA
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Protein sequence | MAKSVVIAEK PSVARDIARV LKCDKKGNGY LEGSKYIVTW ALGHLVTLAD PESYDVKYKK WNLEDLPMLP ERLKLTVIKQ TGKQFNAVKS QLLRKDVNEI IVATDAGREG ELVARWIIDK VRINKPIKRL WISSVTDKAI KDGFANLKPG KAYDNLYASA VARSEADWYI GLNATRALTT RFNAQLNCGR VQTPTVAMIA NREDEIKNFK AQTYYGIEAQ TTNQLKLTWQ DANGNSRSFN KEKIDGIVKG LDKHNATVLE IDKKQKKSFS PGLYDLTELQ RDANKKFGYS AKETLNIMQK LYEQHKVLTY PRTDSRYISS DIVGTLPERL KACGVGEYRP LAHKVLQKPI KANKSFVDDS KVSDHHAIIP TEGYVNFSAF TDKERKIYDL VVKRFLAVLF PAFEYEQLTL RTKVGNETFI ARGKTILHAG WKEVYENRFE DDDVTDDVKE QLLPRIEKGD TLTVKLIMQT SGQTKAPARF NEATLLSAME NPTKYMDTQN KQLADTLKST GGLGTVATRA DIIDKLFNSF LIEKRGKDIH ITSKGRQLLD LVPEELKSPT LTGEWEQKLE AIAKGKLKKE VFISEMKNYT KEIVSEIKSS DKKYKHDNIS TKSCPDCGKP MLEVNGKKGK MLVCQDRECG HRKNVSRTTN ARCPQCKKKL ELRGEGAGQI FACKCGYREK LSTFQERRKK ESGNKADKRD VQKYMKQQKK EEEPLNNPFA EALKKLKFD
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