| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0176 |
|---|
| Symbol | oppF |
|---|
| ID | 2854519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 191189 |
|---|
| End bp | 191962 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637511557 |
|---|
| Product | oligopeptide ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_034531 |
|---|
| Protein GI | 49479187 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase
[COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAG ATTTAATTAC TGTAAAGCAA GTAACGAAAA CGTATGGAAG CAAAAATAAA
GAAATCACAG CGTTAAAAAA TATATCCCTT TCTATCCCGA AAGGGACAAC GCTTGGCATT
ATTGGAGAAA GTGGTTCAGG AAAAACAACA CTTGGAAAGC TCATAGCTGG GATCGAGAGC
CCAACGTCTG GTGAAATTGA TTATAACGGT CAAGTTGTTC ACAAGCTGAA GGCAGCTCAT
AAGCGTGATT TCTTACAGAA AGTACAGTTC ATTTTTCAAG ATTCCACAGC TGCATTAAAT
CCGCGCTGGA AAGTACGCGA TAGCATAACG GAAGGTTATA TTTCATTCGG ACTCGGTGAT
AAAGGATTAA AGGATAAAGT CGCAGGTGAT GCGCTAGAGC GTGTTGGATT AGATAGACGA
TATATTGACC GCTATCCACA CGAATTTAGC GGAGGACAAC GTCAACGTAT TGCTATTGCA
AGAGCGTTAT TGTGTGAGCC AGAAGTATTG ATTCTTGATG AACCAATTTC AGCGTTAGAT
GTTTCATTGC AAATTCAAAT TGTACATCTA CTACAAAAGA TTCAAAGGGA ACAAGGCTAT
ACATATTTAT TTATCGCGCA TGATTTGCCA ATGGTTCACT ACTTGTGTGA AAAGGTGGCT
GTCTTATATA AAGGAGAACT TGTTGAATTT GGAAATACGG ACGAAGTATT CCGTAATCCA
CAACATTCTT ATACAAAAAC ATTATTAGCA TCAACACCAA AAATTTCAGG GTAA
|
|---|
| Protein sequence | MTTDLITVKQ VTKTYGSKNK EITALKNISL SIPKGTTLGI IGESGSGKTT LGKLIAGIES
PTSGEIDYNG QVVHKLKAAH KRDFLQKVQF IFQDSTAALN PRWKVRDSIT EGYISFGLGD
KGLKDKVAGD ALERVGLDRR YIDRYPHEFS GGQRQRIAIA RALLCEPEVL ILDEPISALD
VSLQIQIVHL LQKIQREQGY TYLFIAHDLP MVHYLCEKVA VLYKGELVEF GNTDEVFRNP
QHSYTKTLLA STPKISG
|
|---|
| |