| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0145 |
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| Symbol | cda1 |
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| ID | 2855358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | - |
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| Start bp | 149842 |
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| End bp | 150606 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637511515 |
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| Product | xylanase/chitin deacetylase |
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| Protein accession | YP_034501 |
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| Protein GI | 49479222 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 129 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTTCT TTTTTATTAC GAGTAAAAGA AACTTTAAAC ACATTAGCTT AATAGTGATA
CTTTCCTTAT TTACCGCATG GCTACTCTTT TTGAAAACAT ATTCACACGA GTCTGCTTTT
TCAACTGCTA CAGGGCCTAA AGTTATTTAC AAAGGCGACA CCTCTAAAAA ACAAGTTGCA
TTCACGTTTG ATATTAGTTG GGGAGACAAA AAAGCAATTC CAATCCTTGA TACACTTAAA
GAAAGAGATA TTAAGAATGC AACCTTCTTC CTTTCTGCTG CATGGGCAGA AAGACACCCT
GATGTTGTTG AACGCATCAT AAAAGATGGA CATGAAATCG GTAGTATGGG TTATAATTAC
ACATCCTACA CTTCTCTAGA GACAAATGAA ATACGAAGAG ATCTTCTGCG AGCACAAGAT
GTTTTTACAA AACTCGGTGT GAAACAAATC AAGCTATTGC GTCCACCTAG TGGAGACTTT
AACAAAGCAA CACTTAAAAT AGCAGAATCA CTCGGATACA CTGTCGTTCA TTGGAGTAAT
AACTCAAACG ATTGGAAAAA CCCTGGCGTA AACAATATCG TTTCCACCGT CTCTAATAAT
TTAAAAGGTG GAGATATCGT CTTATTACAT GCATCCGATT CTGCCCTTCA AACAAATAAA
GCTTTGCCAC TGCTTCTACA GAAATTAAAG AGTGACGGCT ATGAGCAAAT ATCCGTATCA
CAACTTATTT CCAACACAAG TACGAAAAGT AAAGATGTTC AATAA
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| Protein sequence | MFFFFITSKR NFKHISLIVI LSLFTAWLLF LKTYSHESAF STATGPKVIY KGDTSKKQVA
FTFDISWGDK KAIPILDTLK ERDIKNATFF LSAAWAERHP DVVERIIKDG HEIGSMGYNY
TSYTSLETNE IRRDLLRAQD VFTKLGVKQI KLLRPPSGDF NKATLKIAES LGYTVVHWSN
NSNDWKNPGV NNIVSTVSNN LKGGDIVLLH ASDSALQTNK ALPLLLQKLK SDGYEQISVS
QLISNTSTKS KDVQ
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