| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0011 |
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| Symbol | pdx1 |
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| ID | 2853662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | + |
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| Start bp | 18521 |
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| End bp | 19408 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637511361 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_034370 |
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| Protein GI | 49476690 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0000000606232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATG TAACAGGGAC AGAACGTGTA AAACGTGGAA TGGCAGAAAT GCAAAAAGGC
GGCGTTATTA TGGACGTAAT TAACGCTGAA CAAGCAAAAA TTGCAGAAGA GGCAGGCGCA
GTTGCCGTTA TGGCATTAGA GCGCGTACCA GCAGATATTC GTGCAGCAGG TGGCGTTTCT
CGTATGGCAG ATCCAACAAT CGTTGAAGAA GTTATGGGTG CTGTGTCAAT TCCGGTTATG
GCAAAATGCC GTATCGGTCA CCTTGTAGAA GCACGTGTAT TAGAATCATT AGGGGTAGAC
TATATCGATG AGAGTGAAGT ATTAACTCCT GCCGATGAAG TATACCATTT AAATAAACGT
GATTACACTG TTCCATTTGT ATGTGGTTGC CGTGATATCG GAGAAGCTGC ACGTCGTATT
GCAGAAGGTG CATCTATGCT TCGTACAAAA GGTGAACCAG GAACAGGGAA CATTGTAGAG
GCAGTTCGTC ATATGCGTCA AGTCAATGCA GAAATCCGTC AAGTTGCAAG TCTACGTGAA
GATGAGTTAA TGACATATGC AAAAAATACT GGTGCTCCTT ATGAAGTACT ACTTGAAATT
AAACGTCTTG GTCGTTTGCC GGTTGTAAAC TTTGCAGCAG GTGGTGTAGC AACACCAGCA
GATGCAGCGT TAATGATGCA ATTAGGTGCG GATGGTGTAT TTGTTGGATC TGGTATCTTT
AAATCAGAGA ACCCAGCGAA ATTTGCACGT GCAATCGTTG AAGCAACAAC TCATTATGAA
GATTACGAAC TAATTGCAAG CCTTTCAAAA GGATTAGGTA ATGCGATGAA GGGTATCGAA
ATTTCAACGT TATTACCAGA ACAACGCATG CAAGAGCGTG GATGGTAA
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| Protein sequence | MTNVTGTERV KRGMAEMQKG GVIMDVINAE QAKIAEEAGA VAVMALERVP ADIRAAGGVS
RMADPTIVEE VMGAVSIPVM AKCRIGHLVE ARVLESLGVD YIDESEVLTP ADEVYHLNKR
DYTVPFVCGC RDIGEAARRI AEGASMLRTK GEPGTGNIVE AVRHMRQVNA EIRQVASLRE
DELMTYAKNT GAPYEVLLEI KRLGRLPVVN FAAGGVATPA DAALMMQLGA DGVFVGSGIF
KSENPAKFAR AIVEATTHYE DYELIASLSK GLGNAMKGIE ISTLLPEQRM QERGW
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