Gene BAS5212 details

Gene Information

• Locus tag: BAS5212
• ID: 2849819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus anthracis str. Sterne
• Kingdom: Bacteria
• Replicon accession: NC_005945
• Strand: -
• Start bp: 5100149
• End bp: 5100676
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637508467
• Product: RNA polymerase sigma factor
• Protein accession: YP_031451
• Protein GI: 49188198
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAA AGGTAGAAGA ATTAATTGAT ATATATAAGC AGCAAATATA TTCCTTATGC 
TATAAGTTAG CGAAGACGAA AGAAGACGCG GAAGATATTT TTCAAGAGAC ATGGATAAAA 
GTTTTTTCAT CGCGGCACCA ACTTTCTTAC GTGGAGAATT ATAAAAAGTG GATTACTACG 
ATTTGTGTTC GTACATTTTA TGATTTTTAT AGCAAAAAGA AAAGGTGGAA AGATCGTGTA 
TTGGATTTAT TTCATAAAGA AGATGGTGGA GAAATAGAGT TTGCAGATGA TGTGAATATA 
TCAGAAGAAT TCATTCAAAA AGTCGAAGCA GAAATGATAC GAGAAGTTAT ACAGTTATTA 
AACGAAAAAT ATAAAACAGT GCTCGTACTC TACTATTATG AACAATATTC TTACAAAGAA 
ATGAGTGAAA TATTAAATAT ACCAATTGGT ACGGTGAAAT ACCGTCTTAA TTATGCCAAG 
AAGCAAATGC GAGAACATTT GGAGGGGTTT GTTCATGAAG GAAGATAA 

 

Protein sequence

MEEKVEELID IYKQQIYSLC YKLAKTKEDA EDIFQETWIK VFSSRHQLSY VENYKKWITT 
ICVRTFYDFY SKKKRWKDRV LDLFHKEDGG EIEFADDVNI SEEFIQKVEA EMIREVIQLL 
NEKYKTVLVL YYYEQYSYKE MSEILNIPIG TVKYRLNYAK KQMREHLEGF VHEGR